Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1359 TATTGGTTGGTTAAGAACTCATGGGGAACTGAGTGGGGTGAAGAAGGCTACATTAGGATGCAAAGGGGTGTAGATTCTGAAGAAGGACTGTGTGGCATAGCCATGCAAGCATCGTACCCCACTGCATAA 129 0.4729 YWLVKNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA* 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1359 42 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 41 - -
Pvu11g1359 42 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 1 20 IPR025661 -
Pvu11g1359 42 Gene3D Cysteine proteinases. Chain C 1 42 - -
Pvu11g1359 42 SUPERFAMILY Cysteine proteinases 1 42 IPR038765 -
Pvu11g1359 42 Pfam Papain family cysteine protease 1 41 IPR000668 GO:0006508|GO:0008234
Pvu11g1359 42 PANTHER VIGNAIN 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1359 Pvu-Chr11 29623518 29623646 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1359 - K16292 gmx:100801364 95.5153