Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1345 GAATATATCCAATCAAAGGAACAAGAAGATGAAACAAAACCTTTGTGGAGATATGTTTCAAAGTTTAGGAAAACTCCTGGTGGTGAAAATAATATGATCAAGTGTAGTTTGTTAAGAGCTCATTTGTTAAGAATTACAAGGGGAGGAGTTAGAATTTGTGCGAATGTGACCCCGTCAAAACTGGTTGAGTTCAAGAAATTAGACAATGAAGCATCATTGAAAATAGAATATTCAAAAAAGAAGAATGTTCCTTTGCCACCTGTATCTGATGAAGGAAAGCAGACCAACAACAATGATCTTAACCCAAAACTGAAAGGTTCTTTACAAGCTGCTTTCAATATTCAAGCGAGGGATACTCTTGATTGTGAAGTTGCGAGGATGTTTTATTCTTCAGGACTACCATTTCATTTAGCAAGAAGTCCTTATTATAGGAGTGCCTTTTCTTTTGCAGCTAATACTTCTAATCTTAGTGGGTATGTACCGCCAACATATAATAAACTGAGAGAAAACCTTCTGCAACCTATAAGAAACTCATGGAATCAGAAAGGTGTAACCATTGTTACTGATGGGTGGAGTGATCCTCAAAGAAGACCACTTATAAATTTTATGGCTATCACTGAGAGTGGACCAATGTTTTTGAAGTCAGTAGATGGGTCTGGTGAAATAAAGGACAAAGATTTTATTGCTAAACACATGAGAGATGCAATTATGGAGGTTGGGCCAAAAAATGTGGTACAAATTATAACTGATAATGCATTTGTATGTGAGGCAGCAGGTATGCTCATAGAATTAGAATTTCCTTCAATCTATTGGACTCCTTCAAAAAATACAGAAAAAAATAGTGATACTTATCAACAATGGTCTTGGATCTTACAAATTGTTGATGATGCAACCTTTATTAAAACCTTTATTGTGGGGCACTCTATGAGATTATCAATGTTCAATAACTTCAACTCATTGAAGTTGCTTTTTGTTGCTTCAACAAGATTTGCTTCAACCATAGTCATGCTAAAATGGTTTAGAAGTTTGAAGAAAGGGCTCCAAGAGATGGTTATTAGTAATGAATGGTCTTCTTACAAAGAGGATAATGTCGATAGTGCACAATTTATGAAGGTTGATTACATACTTGCTTTTACTACTCCTATTTATGATGTACTCAGAAAAACAGATACGGATATGGCTACTCTTCACTTAGTATATGAAATGTGGAATTCAATGATTGAAAATGTGAAAGAGGTCATATACCATCATGAAAGGAAGACAGAAGTTGAATACTCATCATTTTTCGAGGTAGTCAAGTTAATATTAATTGATCGTTGGACTAAGATTAGCACATTACTTCATTGCCTGACTCATTCTTTAAATCCAAGATATTATAGTCATGAATGGTTAAGTGAAGATTCACACAGAGTTGCCCCACATCTAGATAAGGAACTTACTCAGGAAAGGAAGAAATGTTTTATAAGGTACTTTGATGATGCGGATGTAAGGAGACAAGTAAATATAGAGTTTGCAAACTTTTCAGATGGAAGAGAATATTTTGCCGATGTTGACTCTTTAAGGGATAGAGGTCAAATGGATGCAAAATCATGGTGGATTCCGTATTTTTGTGTCCGTGTCGTATCCGTACCCGTATCCGTGTCTGGGCTTCACATTACTGTTACAAAATGGAGGAACATTTTCCTTGTTACCAAGGTCGGAAATGATAGTGGCAGTGTTAAAAACCTCCATTTGTAA 1737 0.3546 EYIQSKEQEDETKPLWRYVSKFRKTPGGENNMIKCSLLRAHLLRITRGGVRICANVTPSKLVEFKKLDNEASLKIEYSKKKNVPLPPVSDEGKQTNNNDLNPKLKGSLQAAFNIQARDTLDCEVARMFYSSGLPFHLARSPYYRSAFSFAANTSNLSGYVPPTYNKLRENLLQPIRNSWNQKGVTIVTDGWSDPQRRPLINFMAITESGPMFLKSVDGSGEIKDKDFIAKHMRDAIMEVGPKNVVQIITDNAFVCEAAGMLIELEFPSIYWTPSKNTEKNSDTYQQWSWILQIVDDATFIKTFIVGHSMRLSMFNNFNSLKLLFVASTRFASTIVMLKWFRSLKKGLQEMVISNEWSSYKEDNVDSAQFMKVDYILAFTTPIYDVLRKTDTDMATLHLVYEMWNSMIENVKEVIYHHERKTEVEYSSFFEVVKLILIDRWTKISTLLHCLTHSLNPRYYSHEWLSEDSHRVAPHLDKELTQERKKCFIRYFDDADVRRQVNIEFANFSDGREYFADVDSLRDRGQMDAKSWWIPYFCVRVVSVPVSVSGLHITVTKWRNIFLVTKVGNDSGSVKNLHL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1345 578 PANTHER OSJNBA0013A04.12 PROTEIN 36 533 - -
Pvu11g1345 578 Pfam Protein of unknown function (DUF 659) 169 276 IPR007021 -
Pvu11g1345 578 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 36 533 - -
Pvu11g1345 578 SUPERFAMILY Ribonuclease H-like 181 546 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1345 Pvu-Chr11 28940534 28942991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1345 - - pvu:PHAVU_011G130000g 1172.15