Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1342 ATGGCTGACGGAACAACTGTTAGCAACCTGCCGGAGGAGATCCTGTCGAACGTCTTCTCCGCCGTCTCCGACACGCGCACGCGAAACTCGCTGTCCCTGGTGTGTCGAAGCTTCTTCCGCTTGGAGCGCAAGACGCGCATCTCGCTCACGCTGCGAGGGAACGCGCGTGACCTGCACCTCATCCCGACCTCCTTCACGCACGTCACACACCTCGACATCTCCTTCCTTTCGCCGTGGGGCCACGCGCTTTTCTGCTCCTCCGCCACCAACACCTTCGACCCACGCCTCCTAGCGCTCCGCCTCCGCGACGCCTTCCCGCACGTCACCTCGCTCGCCGTCTACGCGCGCGACCCCGCTACTCTCCACCTCCTCCTCCTCTCCCCCTGGCCGGAGCTCTCCAGCGTCAAGCTCGTGCGCTGGCACCAGCGCCCGCCGACGTCGCCTGCGGGATCCGACTTCGCCGTGCTGTTCTCGCAGTGCCGATCGCTCGCCTCGCTCGACCTCTCCTCGTTCTACCACTGGCCAGAGGACCTTCCGCCTGTGCTGGCCGCCAACCCTGACACTGCTGCCTCGCTCCGCCGCCTCAACCTCTTGACAACTTCCTTCACGGAGGGTTTCAAGTCTCATCAAATCGAATCCATCACCGCGTCGTGTCCTAACCTGGAGCACTTTCTCGTGGCCTGCAACTTCGATCCGAGATATATAGGGTTTGTTGGGGACGACACGCTGGTTGCTATTCCCTCAAATTGCCCCAAGCTCTCGCTGCTTCACTTGGCCGATACGTCGTCGTTTTCAAATCGCCGAGAGAACGAGGGTTTCGGGGGAGAAGAAGGTAGGGTTACCCGTGCTACTCTTGTGACTTTGTTCTCCGGACTTCCTCTTTTGGAAGAGTTGGTGTTAGATGTCTGTAAAAATGTGAGAGATAGTAGTTTGGCGTTGGAAGTGTTGGGTTCGAAGTGCCCTAATTTGAGGGTTCTGAAGTTGGGCCAGTTTCAAGGGATTTGCTTAGCCCTTGGGTCAAAGCTTGACGGAGTTGCCCTCTGCCATGGACTTCAATCTTTGTCAGTTGGTAACTGCGCGGACCTTGATGACATGGGGTTGATTGAGATTGCTAGAGGGTGTTCCAGACTTGTTAGGTTCGAGCTTCAGGGTTGCATGCTTGTGACTGAGCAGGGGCTTAGGACCATGGCTTGTTTCCTTAGCAGGACTATGATTGATGTCAAGGTTTCTGGCTGCGTCAACCTCGACACCGCCGCTACTCTCAGAGCTTTGGAGCCCATTCGGGACCGGATTGAGCGGCTCCATGTGGATTGTGTGTGGAATGGTTTGAAGGAAAGTGATGGATTGGGGCATGGGTTTCTCAATTTTGATCTGAAGGGTTTAGATGAACTGGATGGTGGTGGTGAGTTAATGGACTACTTTGGGGGTGGAGAATGTGAGAATACAAGCAAAAGGAAGAGGCAGAGATGCAAGTACGAAATGGGGGTTCAAGATTCCTTTTTGGAAAGCAATGACAATGGTTTCTATGGCAAGTGCTGGGACAAGCTGCGGTATCTTTCTCTTTGGATAAAAGTTGGTGATCTGTTGACTCCATTGCCAGTGGCAGGGTTGGAGGATTGTCCCAGTTTGGAAGAGATTCTAATAAAGGTTGAAGGAGATAGCAGGGGGCAACAGAAACCAGCAGAGCGGGAGTTTGGTCTGAGCATTCTGGCTTGTTATCCTCAGCTATTGAAGATGCAGCTGGACTGTGGTGATACTAAAGGTTATGCCCTCACAGCACCATCAGGGCAAATGGATTTGAGCCTGTGGGAGAGGTTCTTTCTGAATGGGATTGGCAGTTTGAGTCTGAATGAGCTTCATTACTGGCCACCACAAGATGAGGATGTGAACCAGAGGAGTGTGTCACTTCCAGCAGCTGGTTTGCTTCAAGAATGTTACACTTTGAGGAAGCTCTTCATTCACGGAACAGCTCATGAGCATTTCATGAACTTTTTCCTCAAGACACCAAACCTAAGGGATGTACAGCTGAGGGAGGATTATTACCCAGCTCCTGAGAATGACATGAGCACAGAGATGAGAGTGGCCTCGTGCAGCCGCTTTGAAGATGCACTGAACAGGCGTCAAATCTGTGATTGA 2136 0.5342 MADGTTVSNLPEEILSNVFSAVSDTRTRNSLSLVCRSFFRLERKTRISLTLRGNARDLHLIPTSFTHVTHLDISFLSPWGHALFCSSATNTFDPRLLALRLRDAFPHVTSLAVYARDPATLHLLLLSPWPELSSVKLVRWHQRPPTSPAGSDFAVLFSQCRSLASLDLSSFYHWPEDLPPVLAANPDTAASLRRLNLLTTSFTEGFKSHQIESITASCPNLEHFLVACNFDPRYIGFVGDDTLVAIPSNCPKLSLLHLADTSSFSNRRENEGFGGEEGRVTRATLVTLFSGLPLLEELVLDVCKNVRDSSLALEVLGSKCPNLRVLKLGQFQGICLALGSKLDGVALCHGLQSLSVGNCADLDDMGLIEIARGCSRLVRFELQGCMLVTEQGLRTMACFLSRTMIDVKVSGCVNLDTAATLRALEPIRDRIERLHVDCVWNGLKESDGLGHGFLNFDLKGLDELDGGGELMDYFGGGECENTSKRKRQRCKYEMGVQDSFLESNDNGFYGKCWDKLRYLSLWIKVGDLLTPLPVAGLEDCPSLEEILIKVEGDSRGQQKPAEREFGLSILACYPQLLKMQLDCGDTKGYALTAPSGQMDLSLWERFFLNGIGSLSLNELHYWPPQDEDVNQRSVSLPAAGLLQECYTLRKLFIHGTAHEHFMNFFLKTPNLRDVQLREDYYPAPENDMSTEMRVASCSRFEDALNRRQICD* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1342 711 PANTHER F-BOX PROTEIN MAX2 4 686 - -
Pvu11g1342 711 SMART LRR_CC_2 374 399 IPR006553 -
Pvu11g1342 711 SMART LRR_CC_2 292 317 IPR006553 -
Pvu11g1342 711 SMART LRR_CC_2 348 373 IPR006553 -
Pvu11g1342 711 Gene3D Ribonuclease Inhibitor 14 448 IPR032675 -
Pvu11g1342 711 ProSiteProfiles F-box domain profile. 4 51 IPR001810 GO:0005515
Pvu11g1342 711 PANTHER UNCHARACTERIZED 4 686 - -
Pvu11g1342 711 Pfam F-box 8 46 IPR041567 -
Pvu11g1342 711 SUPERFAMILY RNI-like 154 414 - -
Pvu11g1342 711 SUPERFAMILY F-box domain 3 42 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1342 Pvu-Chr11 28784504 28786639 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1342 - - gmx:100807914 1229.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1342 11 28784504 28786639 Pvu11g1342 11 28784504 28786639 ECH