Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1336 ATGAAGGCATATGAACCTGATCACACTAGACCTGCAAAGCTTGTCAAAGATACTGATATGACAGCACCAAGCCCCACAACGGTTCTTTACCCCACCAGTGGAGGAAACATCCATTGTTTTAGAGCTATAACTCCTTGTGCTATCTTTGACATATTGTCTCCCCCTTACTCTTCAGAGCATGGAAGACACTGCACCTACTTCCGGCGATCCCAATGGAAAGATCTCCCTGTTAATGTTCAGTTGGATGGAGTGACGGTTTCTGAAGTGACTTGGTTAGAAGAGTTTCAACCTCCTGATGACTTTGTGATCCGGAGAGGACTGTACAGGGGTCCAGTTATTAGAACTTGA 348 0.454 MKAYEPDHTRPAKLVKDTDMTAPSPTTVLYPTSGGNIHCFRAITPCAIFDILSPPYSSEHGRHCTYFRRSQWKDLPVNVQLDGVTVSEVTWLEEFQPPDDFVIRRGLYRGPVIRT* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1336 115 PANTHER UNCHARACTERIZED 5 115 IPR012864 GO:0016702
Pvu11g1336 115 SUPERFAMILY RmlC-like cupins 6 71 IPR011051 -
Pvu11g1336 115 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g1336 115 MobiDBLite consensus disorder prediction 1 15 - -
Pvu11g1336 115 Pfam PCO_ADO 6 113 IPR012864 GO:0016702
Pvu11g1336 115 PANTHER PLANT CYSTEINE OXIDASE 4 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1336 Pvu-Chr11 28552933 28553876 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1336 K23953 - pvu:PHAVU_011G129100g 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1336 11 28552933 28553876 Pvu11g1336 11 28552933 28553876 ECH
Pvu6g1817 6 28567473 28572054 Pvu11g1336 11 28552933 28553876 ECH
Pvu5g0978 5 28208444 28216039 Pvu11g1336 11 28552933 28553876 PCT