Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1329 ATGGCCACAGTTGATATTATCAAATCCTGCATCGATTCTATTAGACAGATATCAGAGCATATTCAAGATTCTACTGTTTATTTAGATGCCGGATCTACAGAAAGTTTCCAATTTTTGGGGGCATATCCAATACTTCTTGAACTTGGAGCACGGGCTATTTGTAGTTTGGAAAACATGTGTGCACTTGATGTTGTTGTTGATTGGAACTCAAATTCTGATCCTGCGAGGAAACTTGTGGTTATCACATCAAGTCTACTAAGTGATGCTCACCGGTATATTTTACGTTGCCTGACCACACATCAAGTTGTTCGTCAATGCATTATATTTACATCTATCTCAGAGACAGCACACTCAGCATTTCCTGATTCACCTCTGGGACCAGATGCATATCATGAATATGAATCCTTACTGGTTCAAGATTATGAAGAACTAGTTAAGAAATCACGGACAAAACCTGGACAGGGAAAGCTTCACGTTGAAGATGGAGGACGTTCAGGGTTTCCTTCCAGTGTAGAGGATGTTCTTAATCTTGAAGCTAGTCCAAGTGGAAGAGATTTTTATGAGAACAATCCATTAGATTACGTTGAACAATCAGTGCTGAAATTGGTTGTTTCTGTTTATCATTTTCCCATGATTTTATGTCCCATTTCACCACGAGTATTTGTTCTACCATCAGAAGGGTTGGTATCTGAAGCACAGTTATCAACTAAGCATGAAGATTCCATTAGTCTTGGTTTGCCTCCGTTAAGTACTGGTATTCTCTCTGATGCTGACGATGTGCCTCCAGGGGCTACTCTTACGGCACACTTTCTCTACCATTTGGCTGCTAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGTGATATGTCAAAATCTGTGGGAAAAGTTTTGACAGACATGTCAAGTCTTTATGACGTAGGCCGCCGTAAACGATCAGCAGGGCTGTTACTCATTGATCGTACACTTGATGTTCTCACTCCTTGCTGCCATGGGGACTCACTTGTTGACCGCATATTTTCTTCTTTGCCCCGTAGAAATAGAACAATTTCTGGTAAAGGTTCAGGAAGCCAATTCAAACTTGGTTCTTTCTACCTGCATCGTGCTCCTTTAGATGTTCAGATACCACTTGCAAGGATCCTCGATGAACAAGATTGGAAAATAGACAATTTTTCTCTTTTAGAAAGCGTTGAGGCTTTTTTGTGTGGGTGGAATTCTGGTAATTCTGATTCTCAGTTGTCTGACTTGATTGACCTTGGCCAGAAAATTCATGACAAGCCTAGTCACACTGATGCAGAGATACTTACTGGGTCCTTTGTCTCTTCTGAAAATTTCCTTGGAATGCCACTTTTGGAAGCTATTCTAGATAGAAGAACGAAAGATGGGGCCTTACTGGTAAAGAAATGGCTACAAGAAACTCTGCGCAGGGAAAATGTTGCCGTGAATGTGAAGTCTCGTCCTGGTGTTGCTACAAAACCGGAGATACGAGCTATGATCAAAGCTTTGTCCAGGAACCAATCCTCTTTGCTAAGGAACAAGGGAATTATCCAATTGGCTTCTGCCACGTTATTTGCCCTTGAAGAATCAAATTATACCCAATGGGATGCATTTAGCAGTGCAGAGAAAATTCTGAGTGTAAGTTCCGGAGAAACAAGTCAAAGTCTTGCCATTCAAATTGGTGATCATATCAACAAGAGTGCTCTTTTGGGATCACGTGTAAATAAAGGGAAAAGGGAGATCTCAAAGGGGTTACTTTCTTTGCAAGATGCTTTGCTGTTGATGATCATTGGATATATATTGGCTGGTGAGAATTTTCCAACATCTAGTGCTGACGGGCCATTTTCTTGGCAAGAGGAACATTTGTTAAAAGAAGCTGTTGTAGACGCGCTTTTTGAAAATCCTTCAGTAGCAAATCTCAAGTTTCTAGATGGACTAAGAGAAGAGCTTGAAACTAATGTTGTTAGCAAGATAAAATCTCAGGGAACTGCTGAAGAATCTTCAGAACTAGATATTGATGATTTTGATGATGATCAATGGGGAAAATGGGGTGACGAAGATGGTGATGATGACAATAAAAATGAACAAGTATATGGTGATGTGCAACTGAAGTTGGAGTTGCGTGATAGGGTGGACAACCTTTTCAAATTTCTTCACAAGTTATCTGACCTGAAAAGAAAGAATATACCATTGAGGGATGGATCGTTGACCATGGAAGCTAATTTTGATGAGGATAGAAAAGGATTGCTTTATAAGCTACTAACAAGGGTGTTGGGCAAGTACGACGTGCCTGGGTTAGAATACCATTCTTCCACTGTCGGACGCCTCTTTAAGAGTGGCTTTGGAAGATTTGGCCTTGGTCAGGCCAAACCAAGTCTTGCTGATCAAAATGTCATTTTGGTGTTTGTTATTGGGGGCATTAATGGGCTCGAGGTGCGTGAGGCTCACGAGGCATTGGCTGAAAGTGGAAGACCTGATATTGAGTTGCTAGTTGGTGGAACAACTCTTCTCACTTCTAATGACATGCTCGATTTACTGCTAGGGGATTCAAGCTGCTTTTAA 2559 0.4099 MATVDIIKSCIDSIRQISEHIQDSTVYLDAGSTESFQFLGAYPILLELGARAICSLENMCALDVVVDWNSNSDPARKLVVITSSLLSDAHRYILRCLTTHQVVRQCIIFTSISETAHSAFPDSPLGPDAYHEYESLLVQDYEELVKKSRTKPGQGKLHVEDGGRSGFPSSVEDVLNLEASPSGRDFYENNPLDYVEQSVLKLVVSVYHFPMILCPISPRVFVLPSEGLVSEAQLSTKHEDSISLGLPPLSTGILSDADDVPPGATLTAHFLYHLAAKMDLKMEIFSLGDMSKSVGKVLTDMSSLYDVGRRKRSAGLLLIDRTLDVLTPCCHGDSLVDRIFSSLPRRNRTISGKGSGSQFKLGSFYLHRAPLDVQIPLARILDEQDWKIDNFSLLESVEAFLCGWNSGNSDSQLSDLIDLGQKIHDKPSHTDAEILTGSFVSSENFLGMPLLEAILDRRTKDGALLVKKWLQETLRRENVAVNVKSRPGVATKPEIRAMIKALSRNQSSLLRNKGIIQLASATLFALEESNYTQWDAFSSAEKILSVSSGETSQSLAIQIGDHINKSALLGSRVNKGKREISKGLLSLQDALLLMIIGYILAGENFPTSSADGPFSWQEEHLLKEAVVDALFENPSVANLKFLDGLREELETNVVSKIKSQGTAEESSELDIDDFDDDQWGKWGDEDGDDDNKNEQVYGDVQLKLELRDRVDNLFKFLHKLSDLKRKNIPLRDGSLTMEANFDEDRKGLLYKLLTRVLGKYDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEVREAHEALAESGRPDIELLVGGTTLLTSNDMLDLLLGDSSCF* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1329 852 Gene3D - 745 846 IPR027482 -
Pvu11g1329 852 SUPERFAMILY Sec1/munc18-like (SM) proteins 768 846 IPR036045 -
Pvu11g1329 852 MobiDBLite consensus disorder prediction 656 676 - -
Pvu11g1329 852 SUPERFAMILY Sec1/munc18-like (SM) proteins 196 332 IPR036045 -
Pvu11g1329 852 PANTHER SEC1 FAMILY DOMAIN-CONTAINING PROTEIN MIP3 3 851 - -
Pvu11g1329 852 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 851 IPR001619 GO:0016192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1329 - - gmx:100808775 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1329 11 28373656 28382521 Pvu11g1329 11 28373656 28382521 ECH