Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1328 ATGGCGGCACTCAAGCTTCTTCTCTCCCAAGCTGGCCGCCATTCCTTCGCCAAACGCGCTTCTCTCTCACACTCTCCTTTCTCTTTCACCTCTCATCGATCCCTCTGCTCTTCCTCCCAATCAAACTCAAACCCTCCCGCCACACCCTCCCAACCCATCCCCATCCAACCAGTTTCCTACCCTATCAAGCCCAAATCCCCGCCGCCTGAACCCTCGTTGGAATCCTCACCACCACCACCTGCCGAGCCGCAATCCCTCCGCCCGCCATCGGACTCGCGGCGAGCGTGGACGCGCGAGGACATCCGATACGTGAAGGACGCGCCGTCGATTGAGGTGGTGTCGTACGCCCCGCGCGTGGCGCCTCTCCCCGATGACAAGGTGGTGGACGAGGGGGTGGAGATTGAGAGGAGGAAGATCGAGGCGGAGAATGAGCTGAGGATGAGAATGGTGAAGGCCACCGAAGAGGAGCGGATGAAGGTGCCGTTTCCGCTTCTGATTAAGCCCAAAAAAAATGAGAAGCCGCCTCCGCTTGAATTGGCAGAAGCCATTCGCCAAGTTAAGGCCAATGCCAAGGCAAAGTTTGATGAAACTGTTGAAGCACATATAAGATTGGGTGTTGATTCAAAGCGAACAGAACTGGCAGTTCGTGGTACTGTGATTCTGCCTCATGGTGCTCCCAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGGGCTGAGGCAGAGGAAGCTAAAGCTGCAGGAGCTGATATAGTTGGTGGTAGAGAGCTTATTGAGGAGATTGCTAGTGGTAAAAATAAGCTCAAAGTTGACAAATGCTTCTCGTCTCCTGGAATGGCACCTCATCTTGGAAAGATAGCACAATACCTTAGAAAGCGCAGACTGATGCCTGATAAGAAGCTAGGTACTCTCACCAGTGATATTGCAGGGCAGTTGAAAGAGTTAAGACAGGGTCGTGTGGAGTTTAAAATGGAAAGTAAATCAATTTTGCATGTGGGACTTGGAAAGGTAAGCTACAAAGAAGATGCTTTACGGGAGAATATTAGTGCATTTATGAATGCTGTATTGCTTGCGAAGCCTGCTGGCTTAAAGAAGACTTCCAAATATGCTGGGTATGTGTTGTCTGTCCATATAAGCAGCACGATGGGCCCAGGATTACCTGTATCAATACAATCATTGTCCAAAGCTGCAGATAACTACAAGAAAACGCATGTGGTATGA 1218 0.5082 MAALKLLLSQAGRHSFAKRASLSHSPFSFTSHRSLCSSSQSNSNPPATPSQPIPIQPVSYPIKPKSPPPEPSLESSPPPPAEPQSLRPPSDSRRAWTREDIRYVKDAPSIEVVSYAPRVAPLPDDKVVDEGVEIERRKIEAENELRMRMVKATEEERMKVPFPLLIKPKKNEKPPPLELAEAIRQVKANAKAKFDETVEAHIRLGVDSKRTELAVRGTVILPHGAPKAVSVAVFAEGAEAEEAKAAGADIVGGRELIEEIASGKNKLKVDKCFSSPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIAGQLKELRQGRVEFKMESKSILHVGLGKVSYKEDALRENISAFMNAVLLAKPAGLKKTSKYAGYVLSVHISSTMGPGLPVSIQSLSKAADNYKKTHVV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1328 405 MobiDBLite consensus disorder prediction 47 86 - -
Pvu11g1328 405 Gene3D - 224 317 IPR016095 -
Pvu11g1328 405 SUPERFAMILY Ribosomal protein L1 170 388 IPR023674 -
Pvu11g1328 405 MobiDBLite consensus disorder prediction 28 94 - -
Pvu11g1328 405 MobiDBLite consensus disorder prediction 28 46 - -
Pvu11g1328 405 CDD Ribosomal_L1 179 387 IPR028364 -
Pvu11g1328 405 Pfam Ribosomal protein L1p/L10e family 187 383 IPR028364 -
Pvu11g1328 405 Gene3D - 179 387 - -
Pvu11g1328 405 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 111 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1328 Pvu-Chr11 28357370 28364025 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1328 - - gmx:100809322 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1328 11 28357370 28364025 Pvu11g1328 11 28357370 28364025 ECH