Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1326 ATGGCGAGTGCAACAACCCATGTTTTTTCAGGGCTCACTGTTTCTTGTGGTAAAGGAAATTCATTCTTCAATTTCAATCACTCTCCTTCTTCTTCCACTCTTCTTTCCTCAAATTTCAGGCCTTTCAACTCTTTCTCCACCAATGGTCTTTTCTCCAGAGATTACTTGTCAAAGGACATGTTTTGCCGCCCAACACGTTCTCCTGTTGTTTGCATGGCCGGTTCCAAGAAAAAGTCTAAGGTTATTAGGCTTGTTTCAACGGCTGGAACTGGATTCTTTTATGCCATAAAGAAAAGCAAGAAGAATGAAAAACTTGAGCTGAAGAAGTATGATCCAAAGGTGAAGCGCCATGTTGTGTTCAAAGAATCTAAATAA 375 0.4027 MASATTHVFSGLTVSCGKGNSFFNFNHSPSSSTLLSSNFRPFNSFSTNGLFSRDYLSKDMFCRPTRSPVVCMAGSKKKSKVIRLVSTAGTGFFYAIKKSKKNEKLELKKYDPKVKRHVVFKESK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1326 124 PANTHER - 49 124 - -
Pvu11g1326 124 SUPERFAMILY Zn-binding ribosomal proteins 76 124 IPR011332 GO:0006412
Pvu11g1326 124 Hamap 50S ribosomal protein L33 [rpmG]. 75 124 IPR001705 GO:0003735|GO:0005840|GO:0006412
Pvu11g1326 124 Pfam Ribosomal protein L33 81 124 IPR001705 GO:0003735|GO:0005840|GO:0006412
Pvu11g1326 124 TIGRFAM rpmG_bact: ribosomal protein bL33 76 124 IPR001705 GO:0003735|GO:0005840|GO:0006412
Pvu11g1326 124 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 49 124 - -
Pvu11g1326 124 Gene3D Ribosomal protein L33 68 124 IPR038584 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1326 Pvu-Chr11 28347623 28349211 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1326 K02913 - adu:107462582 91.6633