Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1320 ATGGCCAAGTTACTGTCTCCAGTGTACACAGAACCTCTCAAACTGCATAACCCATTACTCAATTTTTGTTCCAGAAGCTCATGGAGGATGCTGCCAAAGACTGCAACCCCCATGAACTTTGTGACAAACAATGGCAAACGAAGAGGGTGTGGCAGGGTTAGAGTTGCTGCTGGGGAAAAGTCGTTTTCAACAAGTGAGGCTGTTGCAGATGACTACTATGCAGTTCTTGGTCTGCTTCCTGATGCCACTCCAGCACAGATCAAGAAGGCCTACTACAATTGCATGAAAGCTTGCCATCCAGACTTGAGTGGAAATGATCCTGAGACGACCAATTTCTGCACGTTCATCAATGAAGTTTATGGGGTGCTCAGTGATCCCATCCAGCGCATGATTTATGATGAAATTCATGGGTATTCTTTGACTTCCATTAACCCTTTTCTGGATGAGTCCAGTCCAAAGGATCATGTTTTTGTGGATGAATTCAGCTGCATAGGCTGCAAAAATTGTGCCAATGTAGCCTGTGATGTGTTTGGCATAGAGGAGGAATTTGGAAGAGCCAGAGCATACAGTCAATGCGGGAAATCTGACTTAGTTCAACAGGCTATTGATAGTTGCCCTGTTGACTGCATTCATTGGACATCAGCTGCACAACTATCATTGTTAGAAGATGAAATGCGCCGTGTAGAAAGAGTCAATGTTGCCTTAATGCTTTCAGGAATGGGATCAGCATCAACTGATGTTTTTAGAATGGCAAGTTCAAGATGGGAAAAGAGGCAGGCAAAAGTTTTGGAACAAGCAAGATTGAGAATGATGAAGGAGAAAGGTTCTGATAAAGCAGATATGTTCTGGAACAATCTCTGGGGCAAACCAAAAGACTTAAGTTCAGAGGAGGAAATGAAAGAAAGAGCAAAGAGGGCTGCTGCTGCTGCTAGAAGATGGAGAGAATACTCAAGAAGGGGTGTTGATAAGCCTCCCACATTTAAACTTCCAGAGGCAGCTTCCAGCAAGGACTAG 1014 0.4408 MAKLLSPVYTEPLKLHNPLLNFCSRSSWRMLPKTATPMNFVTNNGKRRGCGRVRVAAGEKSFSTSEAVADDYYAVLGLLPDATPAQIKKAYYNCMKACHPDLSGNDPETTNFCTFINEVYGVLSDPIQRMIYDEIHGYSLTSINPFLDESSPKDHVFVDEFSCIGCKNCANVACDVFGIEEEFGRARAYSQCGKSDLVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNVALMLSGMGSASTDVFRMASSRWEKRQAKVLEQARLRMMKEKGSDKADMFWNNLWGKPKDLSSEEEMKERAKRAAAAARRWREYSRRGVDKPPTFKLPEAASSKD* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1320 337 Gene3D DnaJ domain 55 145 IPR036869 -
Pvu11g1320 337 SUPERFAMILY Chaperone J-domain 71 164 IPR036869 -
Pvu11g1320 337 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Pvu11g1320 337 Pfam DnaJ domain 71 133 IPR001623 -
Pvu11g1320 337 Pfam 4Fe-4S single cluster domain of Ferredoxin I 158 212 - -
Pvu11g1320 337 Gene3D - 154 214 - -
Pvu11g1320 337 SUPERFAMILY 4Fe-4S ferredoxins 155 212 - -
Pvu11g1320 337 PANTHER OS01G0730500 PROTEIN 1 337 - -
Pvu11g1320 337 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 337 - -
Pvu11g1320 337 SMART dnaj_3 70 128 IPR001623 -
Pvu11g1320 337 MobiDBLite consensus disorder prediction 314 337 - -
Pvu11g1320 337 PRINTS DnaJ domain signature 73 91 IPR001623 -
Pvu11g1320 337 PRINTS DnaJ domain signature 91 106 IPR001623 -
Pvu11g1320 337 PRINTS DnaJ domain signature 108 128 IPR001623 -
Pvu11g1320 337 CDD DnaJ 71 125 IPR001623 -
Pvu11g1320 337 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 154 184 IPR017896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1320 Pvu-Chr11 28113567 28118735 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1320 - - gmx:100812547 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1320 11 28113567 28118735 Pvu11g1320 11 28113567 28118735 ECH