Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1319 ATGAGTTCATTTAGCAAAAACTATGTTTTAGTTCTGTTCCTTGTTTTCACTTTGTGGACATGCTATGTAATGTCTCGCAGGTTGCCTGAGGCCAGCTCATCAGAGAGACATGAGAAGTGGATGACTCAGTATGGTAAGGTTTACAAGGATGCTTCTGAGAGGGAAAAACGGTTCCAAATATTCAAGAACAATGTGCAGTTCATTGAGTCCTTCAATGCTGCTGGGGACAAACCTTTCAACCTTAGCATTAACAAATTTGCTGACCTTCACAGTGAAGAATTCAAGGCTTTGCTGACTAATGGTCAGAGGAAGGAACGAAGAGTGTGGAGAGCAAGAGAAACATCGTTTAGGTATGACAGTATCACTAAGATTCCCGCTACCGTGGACTGGAGGAAAAGAGGTGCTGTTACTTCAATCAAGGACCAAGGCACATGTGGAAGTTGTTGGGCATTTTCAACTGTTGCTACAATTGAAGGTCTCCATCATATAACTAAAGGTGAATTGGTGTCCCTGTCAGAACAAGAACTAGTCGATTGTGTTAGAGGTGACAGCGACGGATGCAATGGTGGTTATGTGGAAGATGCCTTTGAATTTCTTGCTAAAAAGGGAGGAATAGCAAGTGAAACACACTACCCCTACAAAGGAGTTAAAAAGAGTTGTAAGGTTAAGAAGGAAAGTCATGGTGTAGCTAAGATCAAAGGGTACGAGAAAGTTCCTGGTAATAGTGAAAAGGCACTCCTGAAAGCTGTGGCACATCAACCAGTGTCAGCTTATGTCGAAGCTGGAGGATCTGCTTTCCAGTTTTATTCAAGTGGGATATTTACAGGAAAGTGTGGGACTGAAATTGATCATTCTGTTACAGTGGTTGGTTATGGAAAAGCTGGTGATGGTCCTAAGTATTGGCTAGTAAAGAATTCATGGGGAACTGAATGGGGTGAGAAAGGCTACATAAGGATGAAGCGAGATATACGTGCCAAGGAAGGTTTATGTGGAATTGCTACAAATGCCTCTTATCCAACTGCTTGA 1026 0.423 MSSFSKNYVLVLFLVFTLWTCYVMSRRLPEASSSERHEKWMTQYGKVYKDASEREKRFQIFKNNVQFIESFNAAGDKPFNLSINKFADLHSEEFKALLTNGQRKERRVWRARETSFRYDSITKIPATVDWRKRGAVTSIKDQGTCGSCWAFSTVATIEGLHHITKGELVSLSEQELVDCVRGDSDGCNGGYVEDAFEFLAKKGGIASETHYPYKGVKKSCKVKKESHGVAKIKGYEKVPGNSEKALLKAVAHQPVSAYVEAGGSAFQFYSSGIFTGKCGTEIDHSVTVVGYGKAGDGPKYWLVKNSWGTEWGEKGYIRMKRDIRAKEGLCGIATNASYPTA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1319 341 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 340 - -
Pvu11g1319 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 142 153 IPR000169 -
Pvu11g1319 341 Pfam Cathepsin propeptide inhibitor domain (I29) 37 94 IPR013201 -
Pvu11g1319 341 SMART pept_c1 124 340 IPR000668 GO:0006508|GO:0008234
Pvu11g1319 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 300 319 IPR025661 -
Pvu11g1319 341 PRINTS Papain cysteine protease (C1) family signature 142 157 IPR000668 GO:0006508|GO:0008234
Pvu11g1319 341 PRINTS Papain cysteine protease (C1) family signature 284 294 IPR000668 GO:0006508|GO:0008234
Pvu11g1319 341 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Pvu11g1319 341 SMART Inhibitor_I29_2 37 94 IPR013201 -
Pvu11g1319 341 Pfam Papain family cysteine protease 124 340 IPR000668 GO:0006508|GO:0008234
Pvu11g1319 341 Gene3D Cysteine proteinases 20 341 - -
Pvu11g1319 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 282 292 IPR025660 -
Pvu11g1319 341 CDD Peptidase_C1A 125 339 IPR039417 -
Pvu11g1319 341 SUPERFAMILY Cysteine proteinases 32 340 IPR038765 -
Pvu11g1319 341 PANTHER SENESCENCE-ASSOCIATED GENE 12 28 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1319 Pvu-Chr11 28084731 28086029 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1319 - K16292 gmx:100817009 574.318