Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1316 GTTGATTCCTTCTATGAGTATCTACTCAAAGCCCATATCCTTTTTGGGAAGGAGGACTTTTGGAAAATGTTTCACTCTCCTTATGTTGCCGTACAAAAATATTTCAGACACGGTTCTTGGTACCATGAAGCTGATATTATTAGGACTGGAAGAGCAACTCATTGGCAGCTTACAAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATTTTAGTGATGCTAATTCATCTCACCGTGAGTTCTTCCATGTGTGGAAGAGATACGGAGTGCTACCAGAGAGGTATTTGCTGGACCACCAGATGATTCATCCTACTGAAAAATATTATCCCTTACGTCCTGAATTAGTCGAGTCAACCTTCTACTTATGTCAAGCCACTAAAGATCCATGGTATATTGAAGTTGGTGAATCAATAGTCAATTCCATTAATTTATACACCAAAGTTGAGGGTGGGTTTGCAAGCATTAAGGATGTGACAACTATGCAGTTGGAAGATCATCAGCATAGTTTTTTTCTTGCTGAAACGTGCAAATATTTATATCTTCTATTTGACGATTCGTTTGTACATGAGAATAATTATGTATTTACCACTGAAGGTCATCCTTTTCCAGTACTCAGCAATTGGCATGAAGAGCTTCCACAAGCTTATGTTCCAACTAATTGGACTTTTGTGAAGATTTCTTTTGAAGTTGGAATCTCACAACTTTTGGTCTTCTAG 726 0.3871 VDSFYEYLLKAHILFGKEDFWKMFHSPYVAVQKYFRHGSWYHEADIIRTGRATHWQLTSLQAFWPGLQVLIGDFSDANSSHREFFHVWKRYGVLPERYLLDHQMIHPTEKYYPLRPELVESTFYLCQATKDPWYIEVGESIVNSINLYTKVEGGFASIKDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFVHENNYVFTTEGHPFPVLSNWHEELPQAYVPTNWTFVKISFEVGISQLLVF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1316 241 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 1 230 IPR044674 GO:0004571|GO:1904380|GO:1904382
Pvu11g1316 241 SUPERFAMILY Seven-hairpin glycosidases 2 218 IPR036026 GO:0004571|GO:0005509|GO:0016020
Pvu11g1316 241 PRINTS Glycosyl hydrolase family 47 signature 56 72 IPR001382 GO:0004571|GO:0005509|GO:0016020
Pvu11g1316 241 PRINTS Glycosyl hydrolase family 47 signature 113 137 IPR001382 GO:0004571|GO:0005509|GO:0016020
Pvu11g1316 241 PRINTS Glycosyl hydrolase family 47 signature 172 192 IPR001382 GO:0004571|GO:0005509|GO:0016020
Pvu11g1316 241 Gene3D - 1 218 IPR012341 GO:0005975
Pvu11g1316 241 PANTHER ALPHA-MANNOSIDASE I MNS5 1 230 - -
Pvu11g1316 241 Pfam Glycosyl hydrolase family 47 2 207 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1316 Pvu-Chr11 27682685 27685545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1316 1 228 Glycoside Hydrolase AT1G27520 78.070 3.43e-134 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1316 K10084 - pvu:PHAVU_011G1272001 516.153