Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1315 ATGAGTTCATTTGACAAAAACAACTATCTTTTTGTTTTGTTCCTTGTTTTCACCTTGTGGACTTGCCATGTAGTGTCTCGCAGGTTGCCTGAGGCCTTCTCGTCAGAGAGACATGAGAAGTGGATGACACAGTATGGTAAGGTCTACAAGGATGATGCTGAGAAGGAGAAACGTTTACAAATATTCAAGAACAATGTGCAGTTCATTGAGTCCTTCAATGCTGCTGGGGACAAACCTTTCAACCTCAGCATTAACAAATTTGCTGACCTTCATAATGAAGAATTTAAGGCTTTACTGACTAATGCTCAGAGCAAGGAAGGTAGAGTGTGGTCAGCAGCAGAAACATCGTTTAAGTATGACAGTGTCACTAAGATTCCTGCTACCATGAACTGGAGGAAAAGAGGCGCTGTTACTCCAATCAAAGACCAAGGAACATGTCGAAGTTGTTGGGCATTTTCAACTGTGGCTACAATTGAGGGTCTCCATCATATAACTAAAGGTGAATTGGTGTCCCTGTCAGAACAAGAACTAGTAGATTGTGTCAGAGGTGACAGCGACGGATGCAATGGTGGTTATGTGGAAGATGCCTTTGAATTTCTTGCTAAAAAGGGAGGAATAGCAAGTGAAACATACTACCCCTACAAAGGAGTTAACAAGAGTTGTAAGGTTAAGAAGGAAAGTCATGGTGTAGCTAAGATCAAAGGGTACGAGAAAGTTCCTGGTAATAGTGAAAAGGCACTCCTAAAAGCTGTGGCACATCAACCAGTGTCAGCTTATGTTGAAGCTGGAGGGTCTGCTTTCCAGTTTTATTCAAGTGGGATATTTACAGGAAAGTGTGGGACTGAAATTGATCATTCTGTTACAGTGGTTGGTTATGGAAAAGCTGGTGATGGTCCTAAGTATTGGCTAGTAAAGAATTCATGGGGAACTGAATGGGGTGAGAAAGGCTACATAAGGATGAAGCGAGATATACATGCCAAGGAAGGTTTATGTGGAATTGCTACCAGTGCTTCTTATCCAACTGTTTGA 1029 0.4189 MSSFDKNNYLFVLFLVFTLWTCHVVSRRLPEAFSSERHEKWMTQYGKVYKDDAEKEKRLQIFKNNVQFIESFNAAGDKPFNLSINKFADLHNEEFKALLTNAQSKEGRVWSAAETSFKYDSVTKIPATMNWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHHITKGELVSLSEQELVDCVRGDSDGCNGGYVEDAFEFLAKKGGIASETYYPYKGVNKSCKVKKESHGVAKIKGYEKVPGNSEKALLKAVAHQPVSAYVEAGGSAFQFYSSGIFTGKCGTEIDHSVTVVGYGKAGDGPKYWLVKNSWGTEWGEKGYIRMKRDIHAKEGLCGIATSASYPTV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1315 342 PRINTS Papain cysteine protease (C1) family signature 143 158 IPR000668 GO:0006508|GO:0008234
Pvu11g1315 342 PRINTS Papain cysteine protease (C1) family signature 285 295 IPR000668 GO:0006508|GO:0008234
Pvu11g1315 342 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Pvu11g1315 342 SUPERFAMILY Cysteine proteinases 36 342 IPR038765 -
Pvu11g1315 342 SMART Inhibitor_I29_2 38 95 IPR013201 -
Pvu11g1315 342 CDD Peptidase_C1A 126 340 IPR039417 -
Pvu11g1315 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 283 293 IPR025660 -
Pvu11g1315 342 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 341 - -
Pvu11g1315 342 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Pvu11g1315 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 301 320 IPR025661 -
Pvu11g1315 342 PANTHER SENESCENCE-ASSOCIATED GENE 12 30 341 - -
Pvu11g1315 342 Pfam Papain family cysteine protease 125 341 IPR000668 GO:0006508|GO:0008234
Pvu11g1315 342 Gene3D Cysteine proteinases 20 342 - -
Pvu11g1315 342 SMART pept_c1 125 341 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1315 Pvu-Chr11 27660030 27661354 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1315 - - gmx:100817009 582.793