Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1314 ATGACTTCCATTGGGAAAAACCAGCATGTTTTAGCTCTACTTCTCCTTCTCTCAATTTGTTCTTCCCAAGTAATGTCCCGCAACATCCATGAGGCATCTATATCCCAAAGACATGAGCAGTGGATGAAACAATATGGTAGAACATACAAGGATGCTGCAGAGAAGCAAAAACGTTTCCTCATATTCAAGGACAATGTTCAATTCATTGAATTTTTCAATACTGCTGGCAACAAACCTTACAAGCTTGGCATCAATCACCTAGCTGACCAAACCAATGAAGAATTTATTGCTTCCCATACTGGATACAAGGGATCGCATGAGTTGAGAATCACAGCACAAACACCATTTAAGTATGAAAACGTTACTCGTATTCCTACAGCAGTTGATTGGAGGGAAAATGGAGCCGTTACTCCAATCAAGGACCAAGGCCGTTGTGGTAGCTGCTGGGCATTCTCAACAGTTGCTGCAACAGAAGGTATCTACCAAATAACTACAGGTAAGCTAGTTTCCCTGTCAGAGCAAGAGTTAGTGGATTGTGACAGTGTGGATCAAGGATGTGATGGAGGTCTCATGGAAGATGGTTTCGAATTCATTATAAAAAATGGTGGAATCACCAGTGAGGTAAACTACCCCTACACTGGAGTTAATGAAACTTGTGACACAAAGAAAGAGGCTTCTCCGGAAGCTCAAATAAAAGGGTATGAAACAGTACCTCCAAATAGTGAGGAAGCACTACAGAAAGCAGTTGCAAACCAACCTGTGTCAGTTAGCATTGATGCTGGAGGATCTGCTTTTCAATTTTACTCAAGTGGGGTTTTCACTGGACAATGTGGAACTCAACTAGACCATGGTGTTACAGCAGTTGGCTATGGAATCACCGATAATGGTACTGAGTATTGGATAGTGAAAAATTCTTGGAGCACACAATGGGGTGAAGAAGGATACATAAGAATGGAACGAGGCATAGATGCCAAAGAAGGCCTATGTGGCATTGCCATGGATGCTTCATACCCAGTTGCTTAA 1023 0.4213 MTSIGKNQHVLALLLLLSICSSQVMSRNIHEASISQRHEQWMKQYGRTYKDAAEKQKRFLIFKDNVQFIEFFNTAGNKPYKLGINHLADQTNEEFIASHTGYKGSHELRITAQTPFKYENVTRIPTAVDWRENGAVTPIKDQGRCGSCWAFSTVAATEGIYQITTGKLVSLSEQELVDCDSVDQGCDGGLMEDGFEFIIKNGGITSEVNYPYTGVNETCDTKKEASPEAQIKGYETVPPNSEEALQKAVANQPVSVSIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGITDNGTEYWIVKNSWSTQWGEEGYIRMERGIDAKEGLCGIAMDASYPVA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1314 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 142 153 IPR000169 -
Pvu11g1314 340 SMART Inhibitor_I29_2 38 95 IPR013201 -
Pvu11g1314 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 299 318 IPR025661 -
Pvu11g1314 340 CDD Peptidase_C1A 125 338 IPR039417 -
Pvu11g1314 340 PRINTS Papain cysteine protease (C1) family signature 142 157 IPR000668 GO:0006508|GO:0008234
Pvu11g1314 340 PRINTS Papain cysteine protease (C1) family signature 283 293 IPR000668 GO:0006508|GO:0008234
Pvu11g1314 340 PRINTS Papain cysteine protease (C1) family signature 299 305 IPR000668 GO:0006508|GO:0008234
Pvu11g1314 340 PANTHER SENESCENCE-ASSOCIATED GENE 12 25 339 - -
Pvu11g1314 340 SUPERFAMILY Cysteine proteinases 30 339 IPR038765 -
Pvu11g1314 340 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 339 - -
Pvu11g1314 340 Pfam Papain family cysteine protease 124 339 IPR000668 GO:0006508|GO:0008234
Pvu11g1314 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 281 291 IPR025660 -
Pvu11g1314 340 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Pvu11g1314 340 Gene3D Cysteine proteinases 21 340 - -
Pvu11g1314 340 SMART pept_c1 124 339 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1314 Pvu-Chr11 27539197 27540319 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1314 - - gmx:100817340 587.03