Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1291 ATGGATTGTTTTCCTTCCCCTTATCACCATCACCACCGGTCTCGAACTAAGTCATCGTCGCGTTCGGTTCGCAAAGACGAGAACTCGGTTCCGGTCGAGCCTCTTCGAATTTCACTCGACTGCGTTCAGTCACCGCCGGCCAAGCCTTCGTCGTCGTCTCCGCTGTCTCTCCTCCGATCTCCGACAAGCTCTCTTCCGCTCAGGGAGCTTCTCCTTCTCTCACCTTCTTCCGCGCGGAGATCCAAGGCGCGGTTCGACGAGGAGGCGCCAGAGGCAGCAGGAGTGCGGCGCCGGTGCAAGAACCGAGCGGCGTCGCCGAGGAGCTCGCGGCGGTGTAGGCGCGAGGAGAAGGAGGGAGGTCCGGTGGAGGAGGCTGTGAAACAGAAGAAGAGGAGGCACAGTGGGAGACACAGGAAGGAGAGGCTGAGCTTGGTGCCTTTTCAACCACCTTCAACTTCATCTCCAACTGATGAAGAGAATGGGGGTGATCTAGATCGTGTTGGAGCGTTCATTACTGATTTGGTTATGTGGAGAGATGTTTCGAAATCGACCCTTTGGTTTGGTTTCGGGTGTCTTTGTTTCTTGTCTTCTTGCTTCACTAAAGGAATCAACGTTAGCATTTTCTCGGCCATATCACGATTGGCAATTCTCTTGTTGGGAGTTTCCTTCTTCTCAAACACAGTTTTCCAAAGAAACCAGATTGAGAAAAGGAGTTTTGCCAAGTTGAAAGAAGATGACATTTTACATCTTGCAAAATTGATTCTTCCTGCATTAAATTTTGCAATTTCAAAGACTAGAGAGCTGTTTTCAGGAGAACCGTGCATGACCCTGAGAGTAGCTCCTTTCCTTCTACTTGGAGCGGAGTATGGTCATCTTATTACAATTTGGAGGCTCTGTGCCATTGGATTTTTTGTCAGCTTCAGTGTACCAAAGCTTTATTCCTGCTACTCGGCTCAGATAAATCAGCGAGTGGAGTGCTTGAAATTGCGATTGGTGGACACATGGAATGCTTGTACTCACAAGAAGAAAGTGGTCGCTTTGGTGCTTATCACATTCTGGAATCTATCTACAATAAAGACTCGAATCTGCACAGCATTTATATTGCTTGTAATACTCAGATATTTCCGGCAAGATATCACGGAACATGTAGAAGCTGATGGAATGGCAGAGAAGGAGCAGAATCAGGCATTGGTGGTGGTGGCAGAACCTGAGGAAGAGGAACCGCGGCATGCACTAGTGGTGGCTGAACGAAAGCGCCAATGCTAG 1266 0.4913 MDCFPSPYHHHHRSRTKSSSRSVRKDENSVPVEPLRISLDCVQSPPAKPSSSSPLSLLRSPTSSLPLRELLLLSPSSARRSKARFDEEAPEAAGVRRRCKNRAASPRSSRRCRREEKEGGPVEEAVKQKKRRHSGRHRKERLSLVPFQPPSTSSPTDEENGGDLDRVGAFITDLVMWRDVSKSTLWFGFGCLCFLSSCFTKGINVSIFSAISRLAILLLGVSFFSNTVFQRNQIEKRSFAKLKEDDILHLAKLILPALNFAISKTRELFSGEPCMTLRVAPFLLLGAEYGHLITIWRLCAIGFFVSFSVPKLYSCYSAQINQRVECLKLRLVDTWNACTHKKKVVALVLITFWNLSTIKTRICTAFILLVILRYFRQDITEHVEADGMAEKEQNQALVVVAEPEEEEPRHALVVAERKRQC* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1291 421 PANTHER RETICULON-LIKE PROTEIN B17 1 401 IPR044647 -
Pvu11g1291 421 PANTHER RETICULON-LIKE PROTEIN B17 1 401 - -
Pvu11g1291 421 MobiDBLite consensus disorder prediction 44 61 - -
Pvu11g1291 421 MobiDBLite consensus disorder prediction 108 129 - -
Pvu11g1291 421 ProSiteProfiles Reticulon domain profile. 171 330 IPR003388 -
Pvu11g1291 421 MobiDBLite consensus disorder prediction 77 162 - -
Pvu11g1291 421 MobiDBLite consensus disorder prediction 80 98 - -
Pvu11g1291 421 MobiDBLite consensus disorder prediction 1 61 - -
Pvu11g1291 421 Pfam Reticulon 172 325 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1291 Pvu-Chr11 26717785 26720968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1291 - - var:108339769 655.595