Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1286 ATGGGGTGGTACAGAAGGGGAGCTCTTGATCACTTTCGCATCTTGGCTTCAAGATTTATGCCTCAAAATCCAACTTTTCGGCATAGTTTTAGTTGCCAATCTTGGTATTTTGATTCAGGTTCAAAAGGAGCTAGCGTTAATGGGTTCTCTTCATGGTGTTCTATTCCTCAGAGACTGGGGACACAAGGTGTTGTTGGAATTAATGGGAACTTTCACAATCTCTTTCCTTTGGGGGCTAAGAGATTTTATTATATTGATCCCTATAATGTGGAACATTTCAAGCCAAGGGGGCTACGGCATTGGTTTAAGAATTCCAGACATGTTTTTGTTGTGATGGTTGGTTCGGGGGTTTTAATCACTGTGTATTTTGGGAATTTGGAAATGGTTCCTTATACCAAGCGAACCCATTTGATTCTGTTGTCAAAAGCCATGGAGAGGAGGCTGGGGGAGAACGAGTTTGAGCAAATGAAAGCAACTTTTAAGGGTAAGATATTGCCTCCTATACATCCTGAAAGTGTGAGGGTGACAATGATAGCTAAGGAAATAATTGATGCATTACAAAGAGGGTTGAGAAAGGATAAGATGTTGAATGATTTGGGGTATACATCAGAGCATACTGTGCTGGTTGAAGGAGATGGAAGGGAGACATTGAATGCATTGGTTGGGAGTGAAGAGAAGGTTGAAAGGAGTTGGCACGAGGGGGGTAAGATTCTTGATGAGAAAAAAAGCTGGAAAAATGATCAGGAAAGAGGGTCAACAGCTACTACATCACATTTGGATGGATTGAATTGGGAAATTTTGGTCGTAAATGAGCCAGTTGTTAATGCCTTCTGCTTACCTGGCGGGAAGATAGTTGTGTTCTCTGGTTTGTTTGAGCATTTTAAAAGTGATGCGGAGATAGCAACTATTATTGGGCACGAGGTTGGACATGCTGTGGCAAGACACAGTGCAGAGGGGATTACAAAGAACCTATGGTTTGCTATTCTACAATTGATACTTTATCACCTTGTCATACCTGATATTGTCAACATACTGTCATCCCTTTTCTTGCACCTACCTTTCTCCAGGAGGATGGAAATAGAAGCTGATTACATTGGGTTGCTGCTAATTGCATCAGCAGGCTATGATCCCCGGGTGGCACCTAGAGTGTATGAAAAGTTGGAAAAAATTGCTGGTGGTTCTACCCTTATGGATTATCTTTCTACTCACCCTTCTGGTATACAAAGAGCAGAATTGCTGGCCCAAGCTAAGATAATGGAAGAAGCATTTAGTATATATAGAGATGTAAGAGAAGGACATAGGGTTGAAGCTTTTCTTTAG 1320 0.4152 MGWYRRGALDHFRILASRFMPQNPTFRHSFSCQSWYFDSGSKGASVNGFSSWCSIPQRLGTQGVVGINGNFHNLFPLGAKRFYYIDPYNVEHFKPRGLRHWFKNSRHVFVVMVGSGVLITVYFGNLEMVPYTKRTHLILLSKAMERRLGENEFEQMKATFKGKILPPIHPESVRVTMIAKEIIDALQRGLRKDKMLNDLGYTSEHTVLVEGDGRETLNALVGSEEKVERSWHEGGKILDEKKSWKNDQERGSTATTSHLDGLNWEILVVNEPVVNAFCLPGGKIVVFSGLFEHFKSDAEIATIIGHEVGHAVARHSAEGITKNLWFAILQLILYHLVIPDIVNILSSLFLHLPFSRRMEIEADYIGLLLIASAGYDPRVAPRVYEKLEKIAGGSTLMDYLSTHPSGIQRAELLAQAKIMEEAFSIYRDVREGHRVEAFL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1286 439 CDD M48C_Oma1_like 260 422 - -
Pvu11g1286 439 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 80 431 - -
Pvu11g1286 439 Gene3D Metalloproteases ("zincins"), catalytic domain 251 319 - -
Pvu11g1286 439 PANTHER METALLOENDOPEPTIDASE OMA1 80 431 - -
Pvu11g1286 439 Pfam Peptidase family M48 255 414 IPR001915 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1286 Pvu-Chr11 26610934 26614307 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1286 K23010 - gmx:100799127 675.241