Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1283 ATGGCGCCCGATCCTAATCGTGCCGGCACCAGCGCCAGCACCAGTGCGTCCAAAGACGACGCCGTTACGAAGAAGAAGGTCGAGAACGAAGATCTGTCCGATGAGGATTTGGCGTTGAAGCAGCAGCTAGACCTTTACGTGGAGAGGGTTCAAGATGCCGACAAGGGATTGCAGAAGGTTGCACTCGAGAGCATGAGGCAAGAAATTCGAACTTCCACGAGCTCTATGACTTCTGTTCCTAAACCCTTGAAGTTTCTTCGCCCGCATTATGGAACTCTTAAGACGTATTATGAAACTATGGTCGAGTCTGATTTGAAGAAGTACCTTGCGGATATATTGTCGGTTTTGGCGCTCACAATGTCTGCCGAAGGAGAACGAGAAAGCCTCAAGTATAGATTACTGGGTTCGGAGGGCGATATTGGTTCATGGGGCCACGAGTATGTTAGGAATCTGGCCGGAGAAATTGCACAAGAATACGCAAAACGACAGAGTGAAGAGACTCCCATAGATGATCTCATGGAACTCGTGCAACAAATAGTTGCTTTTCACATGAAGCATAATGCAGAACCTGAAGCTGTTGATCTTTTGATGGAGGTTGAAGACCTTGGTATGTTGAGTGCACATGTTGACAAAACAAATTTTAAAAGAACTTGCCTATATCTCACAAGTTCAGCAAGATACCTCCCAGGGCCAGATGATATGCTAGTTTTGGACATTGCATACTCAATTTATAAACAATTTGAAGAATATCCTAATGCACTCCAAATTGCATTGTTCATGGATAACATGCAGCATGTGAGGGATGTGTTCACCTCTTGTAATGATGTGCTGCGAAAGAAGCAATTTTGTTACATGCTTGCACGTCATGGAATTACTTTTGAGCTTGATGAGGAGATGGCTGCAGATGATGAGGACAGAGAAATGTTTCAGGATATTATCAACAATTCTAAGTTAAGTGAAGGATATCTCACCCTTGCTCGTGACATTGAAGTTACGGAGCCCAAGTCCCCTGAGGATATATACAAGGCACACTTGCTTGATGGCCGGGCTAGTGCTGGTGCAAGTGTTGATTCAGCTAGACAGAATCTTGCTGCAACTTTTGTTAATGCATTTGTAAATGCTGGCTTTGGTCAGGATAAATTAATGACTGTTCCTTCAGATTCTTCAAGTAGTGCTTCTTCTGGAAATTGGCTTTTCAAAAACAAGGAACATGGGAAGACTAGTGCTGCAGCTAGTCTGGGTATGATTTTACTGTGGGACGTTGACTCAGGACTTGCTCAACTTGACAAGTACTTCCATAGTAATGATAATCATGTTATTGCTGGTGCATTATTGGGAGTCGGAATTGTCAATTGTAGTATCAAGAATGACTGTGATCCTGCAATGGCACTTCTTGGTGATTATACAGACAAAGAAGACACATCAATCAGGATTGGTGCTATAATGGGTTTGGGAATTGCATATGCTGGTTCCCAGAATGAGCAGTTACGGGAGAAACTGACAGGTGTACTGAATGATTCTAAAGCATCACTTGATGTGCTTGCTTTCACTGCTATTTCTCTGGGCTTGATCTTTGTGGGTTCTTGCAATGAGGAAATTGCCCAAGCAATTATATATACACTAATGGACAGGAGTGAGTCAGAGTTAGGAGAGCCCCTTACCCGACTTTTACCTCTTGGCCTTGGTCTTCTATATCTTGGGAAGCAGGACAGTGTTGAGGCAACTGCCGAAGTTTCAAAGACTTTTAATGAAAAAATTAGGAAGTATTGTGACATGACACTACTGTCATGTGCCTATGCTGGAACTGGAAATGTTCTCAAGGTTCAGAATCTCTTGGGTCATTGTTCTCAACATCTTGATAAAGGTGAAACTCACCAAGGTCCTGCTGTGCTTGGAATTGCTATGGTAGCCATGGCTGAAGAACTGGGAGTTGAGATGGCAATTCGATCATTAGAACATCTTCTGCAGTATGGAGAGCAGAATATTCGCCGAGCAGTTCCTCTCGCACTTGGTCTACTTTGTATATCAAATCCAAAGGTCAATGTTATGGATACCTTAAGCAGACTGAGCCATGATACTGATTCAGAAGTAGCTATGGCGGCAGTAATCTCCTTGGGTCTAATAGGTGCTGGTACGAACAATGCCCGAATTGCTGGCATGCTTCGTAATCTTTCAAGTTATTACTACAAGGATACCAGCCTTCTATTTTGTGTGCGGATTGCCCAAGGTCTTGTGCATTTGGGAAAGGGCTTATTAACACTTAATCCATATCATTCAGATCGTTTCCTACTATCACCGACAGCGCTTGCTGGACTAATTACCATGTTGCACGCTTGCCTAGATATGAAAGCCATTGTGTTGGGGAAATATCACTATGTTCTGTACTTCCTCGTTTTGGCAATGCAGCCAAGGATGTTACTGACTGTGGATGAGAACTTGAAGCCTTTACCAGTGCCAGTTCGTGTTGGCCAAGCAGTAGATGTTGTTGGACAAGCAGGTCGTCCTAAAACAATTACTGGCTTTCAGACCCACTCCACTCCTGTTCTCCTGGCTGCTGGGGACAGGGCAGAGCTGGCAACGGAAAAATACCTTCCCCTATCGCCAATTCTTGAAGGTTTTGTAATTTTGAAGGAGAATCCAGATTATAGGGAAGAGTGA 2658 0.4375 MAPDPNRAGTSASTSASKDDAVTKKKVENEDLSDEDLALKQQLDLYVERVQDADKGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYGTLKTYYETMVESDLKKYLADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQSEETPIDDLMELVQQIVAFHMKHNAEPEAVDLLMEVEDLGMLSAHVDKTNFKRTCLYLTSSARYLPGPDDMLVLDIAYSIYKQFEEYPNALQIALFMDNMQHVRDVFTSCNDVLRKKQFCYMLARHGITFELDEEMAADDEDREMFQDIINNSKLSEGYLTLARDIEVTEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSSSSASSGNWLFKNKEHGKTSAAASLGMILLWDVDSGLAQLDKYFHSNDNHVIAGALLGVGIVNCSIKNDCDPAMALLGDYTDKEDTSIRIGAIMGLGIAYAGSQNEQLREKLTGVLNDSKASLDVLAFTAISLGLIFVGSCNEEIAQAIIYTLMDRSESELGEPLTRLLPLGLGLLYLGKQDSVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCSQHLDKGETHQGPAVLGIAMVAMAEELGVEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGAGTNNARIAGMLRNLSSYYYKDTSLLFCVRIAQGLVHLGKGLLTLNPYHSDRFLLSPTALAGLITMLHACLDMKAIVLGKYHYVLYFLVLAMQPRMLLTVDENLKPLPVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGDRAELATEKYLPLSPILEGFVILKENPDYREE* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1283 885 PIRSF 26S_protsm_Rpn1 3 626 IPR016643 GO:0000502|GO:0030234|GO:0042176
Pvu11g1283 885 PIRSF 26S_protsm_Rpn1 620 885 IPR016643 GO:0000502|GO:0030234|GO:0042176
Pvu11g1283 885 Pfam Proteasome/cyclosome repeat 479 509 IPR002015 -
Pvu11g1283 885 Gene3D - 348 791 IPR011989 -
Pvu11g1283 885 MobiDBLite consensus disorder prediction 19 33 - -
Pvu11g1283 885 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 15 884 - -
Pvu11g1283 885 Pfam RPN1 N-terminal domain 43 345 IPR040892 -
Pvu11g1283 885 Pfam 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal 829 882 IPR041433 -
Pvu11g1283 885 MobiDBLite consensus disorder prediction 1 33 - -
Pvu11g1283 885 SUPERFAMILY ARM repeat 40 749 IPR016024 -
Pvu11g1283 885 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 15 884 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1283 K03028 - gmx:100799779 1625.14