Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1279 ATGTTAGAAGGTGCAAAATCAATGGGTGTCGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTGTAGGTATTGGAAACGTATTCAGTTCATTAATTCATTATGTGGCAAGAAATCCATCATTGGCAAAACAATTATTCGGATATGCAATCCTGGGCTTTGCTCTAACCGAGGCTATTGCCTTGTTCGCATTAATGATGGCCTTTTTGATTCTCTTTGTTTTCTAA 225 0.4044 MLEGAKSMGVGAATIASAGAAVGIGNVFSSLIHYVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLILFVF* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1279 74 PANTHER ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL 1 74 IPR000454 GO:0015078|GO:0015986|GO:0045263
Pvu11g1279 74 PANTHER ATP SYNTHASE SUBUNIT 9, MITOCHONDRIAL 1 74 - -
Pvu11g1279 74 PRINTS ATP synthase C subunit signature 8 27 IPR000454 GO:0015078|GO:0015986|GO:0045263
Pvu11g1279 74 PRINTS ATP synthase C subunit signature 29 44 IPR000454 GO:0015078|GO:0015986|GO:0045263
Pvu11g1279 74 PRINTS ATP synthase C subunit signature 46 71 IPR000454 GO:0015078|GO:0015986|GO:0045263
Pvu11g1279 74 Pfam ATP synthase subunit C 8 70 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pvu11g1279 74 CDD ATP-synt_Fo_c_ATP5G3 6 70 - -
Pvu11g1279 74 ProSitePatterns ATP synthase c subunit signature. 36 57 IPR020537 -
Pvu11g1279 74 Gene3D F1F0 ATP synthase subunit C 3 72 IPR038662 -
Pvu11g1279 74 Hamap ATP synthase subunit c [atpH]. 3 71 IPR000454 GO:0015078|GO:0015986|GO:0045263
Pvu11g1279 74 SUPERFAMILY F1F0 ATP synthase subunit C 3 72 IPR035921 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1279 K02128 - gra:27429617 97.8265