Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1272 ATGAAGTCGCCAGATGTGGACTTAGGCGACCAGGCAGTCGGAGATCGCCAGAACAAGCACATCGCCGAAGTTAAAGGAGAAGCAGATTATGAAGGCGGCCGGCGAGACCACAGGGAAGCTCAACATCTGGGATTTGAGGATTTCATCCCACCATTTGCAAACACTAGTGGCTCAGACATACTTAAGGGTGTGAACTATGCATCTGGATCAGCTGGTATTCTCCCTGAGAGTGGCACACATATGGGTACGAATGTGAATTTGGGAGTACAGATGCAAAACCACAGAGCCACATATTCGAGAATTGGCATGAAACTTGGAGATTCTGACAAAGCTAAGGAACATCTTAACAAGTGTTTGTATTACATCAACATAGGCAGCAATGATTATATAAACAATTACTTCCTTCCCCAAATTTACAAATCAAGTACCACCTATACCCTAGACCAATATTCCAACATTCTTATTGATCAGTTATCTCAAAATATTCAGGCACTGCATGAGGAAGTTGGGGCAAGAAAATTTGTCTTAGTTGGAATAGGTCTTATTGGTTGCACTCCAAATGCCATCTCTAATCAAAGCAGAAATGGATCTTATTGTGATGAAGAGAAAAACAATGCTGCGTTTATGTTCAACGTTAAGCTCAAATCTCTTGTGGATAATTTCTATAACAACTATTCTGATTCCAAATCCATCTTCATTAACAGCACTGCAGGAACCCTAGACAGTTCCCTTGGTTTCACTGTTTCAAATGCTTCTTGTTGCCCATCAGGGACGAATGGGTTGTGTGTTCCTAATGAAACACCATGCGAGAACAGAACCAAATACGTGTGTTGGGATCAATTCCATCCCACAGAGTCTGTCAATCAAATCACTGCAATAAGTTCATACAATGGTTCTAATCCAGCTTTTACTTATCCCATGGATATCACGCACCTTGTTCAGTCCTGA 948 0.4167 MKSPDVDLGDQAVGDRQNKHIAEVKGEADYEGGRRDHREAQHLGFEDFIPPFANTSGSDILKGVNYASGSAGILPESGTHMGTNVNLGVQMQNHRATYSRIGMKLGDSDKAKEHLNKCLYYINIGSNDYINNYFLPQIYKSSTTYTLDQYSNILIDQLSQNIQALHEEVGARKFVLVGIGLIGCTPNAISNQSRNGSYCDEEKNNAAFMFNVKLKSLVDNFYNNYSDSKSIFINSTAGTLDSSLGFTVSNASCCPSGTNGLCVPNETPCENRTKYVCWDQFHPTESVNQITAISSYNGSNPAFTYPMDITHLVQS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1272 315 Pfam GDSL-like Lipase/Acylhydrolase 36 292 IPR001087 GO:0016788
Pvu11g1272 315 Gene3D SGNH hydrolase 18 300 IPR036514 -
Pvu11g1272 315 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 40 314 - -
Pvu11g1272 315 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 40 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1272 Pvu-Chr11 25657056 25660298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1272 40 315 Acyl Lipid Metabolism Gene Families AT4G10950 29.861 2.63e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1272 - - pvu:PHAVU_011G123300g 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1272 11 25657056 25660298 Pvu11g1272 11 25657056 25660298 ECH