Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1260 ATGGAGTGCAAAAGTGAAGAGCGTGTCTCTAAACTACTTGGAGCCCAAACCCATGTTTGGAATCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGATTTGGACATACCTGATATCATACACAAGTATGGTGAACCCATGCCACTCTCACAACTCACTGCTTCACTATCACTCAACCCTTCCAAAGCCAACTGCATTTACCGCTTGATGCGAATCTTAACCCATTCTGGCTTCTTCTCTCAACTCAAGTTCAATGAGAATGATCTTGAAATGGGTTATGTCTTGACTGATGCTTCCACTCTACTACTTAAGGACAACCCCTTAA 337 0.4184 MECKSEERVSKLLGAQTHVWNHIFSFINSMSLKCAIDLDIPDIIHKYGEPMPLSQLTASLSLNPSKANCIYRLMRILTHSGFFSQLKFNENDLEMGYVLTDASTLLLKDNPL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1260 112 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pvu11g1260 112 Gene3D - 2 106 IPR036388 -
Pvu11g1260 112 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Pvu11g1260 112 PANTHER ORCINOL O-METHYLTRANSFERASE 6 110 - -
Pvu11g1260 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 112 IPR016461 GO:0008168
Pvu11g1260 112 PANTHER O-METHYLTRANSFERASE 6 110 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1260 Pvu-Chr11 21629431 21629767 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1260 - K16040 pvu:PHAVU_011G1222000 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1260 11 21629431 21629767 Pvu11g1260 11 21629431 21629767 ECH