Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1258 ATGGAGTGCAAAAGTGAAGAGCGTGTCTCTAAACTACTTGGAGCCCAAACCCATGTTTGGAATCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGATTTGGACATACCTGATATCATACACAAGTATGGTGAACCCATGCCACTCTCACAACTCACTGCTTCACTATCACTCAACCCTTCCAAAGCCAACTGCATTTACCGCTTGATGCGAATCTTAACCCATTCTGGCTTCTTCTCTCAACTCAA 260 0.4269 MECKSEERVSKLLGAQTHVWNHIFSFINSMSLKCAIDLDIPDIIHKYGEPMPLSQLTASLSLNPSKANCIYRLMRILTHSGFFSQL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1258 86 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pvu11g1258 86 PANTHER O-METHYLTRANSFERASE 8 84 IPR016461 GO:0008168
Pvu11g1258 86 PANTHER O-METHYLTRANSFERASE 8 84 - -
Pvu11g1258 86 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 86 IPR016461 GO:0008168
Pvu11g1258 86 SUPERFAMILY "Winged helix" DNA-binding domain 10 85 IPR036390 -
Pvu11g1258 86 Gene3D - 2 86 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1258 Pvu-Chr11 21507492 21507751 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1258 - K16040 pvu:PHAVU_011G1221000 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1258 11 21507492 21507751 Pvu11g1258 11 21507492 21507751 ECH