Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1237 ATGAGCAATGGCGGTGGGAAGACTGGAAGACAGCTTGAGCAGCCCGGCACATGGAGGAGGAGGAAAGTGGGTGGTGGTGACGACTTTGCCAGGGCAATTGCGAAGATTGCGGTAGCGCAGGTGTGCGAAAGCGAGGGGTTTCAGGCTTTTCAGCAGTCGGCTCTGGACGCGTTGTCTGACGTTGTGGTTCGGTACATTTTGAACGTTGGGAAATCGGCGCATTGCCATGCTAATCTTTCAGGGAGAACTGAAAGCAATGCTTTTGATGTCATTCAAGGGTTGGAAGATATGGGATCAGTGCAGGGGTTTGCAGGTGCTTCTGAGGTGGATCATTGCCTTGAAAGTTCAGGTGTTATTAGGGAAATTTTTCATTTTGTTAACGAGGGTGAACCGGTTGTGTTTGCACATCCCATTCCTCGGTTTCCAGTTGTGAAGGAACGGGTGCTTAACCCTAGCTTTTTGCAAAAAGGAGAAGAACCTCCTGGCGATCATATTCCTGCTTGGTTGCCTGCCTTCCCTGATCCGCAAAATTCTTCACAGTCACCAGTGGTGAATGGAAGAGGTACAGAACCTCGTGCAGTAAAATTTGAGCAAGAAAGAGAAAACGGCAAGGGGGAGTGGCCTGTGTTGAATTTGAAGCAGCAGATGGTCTCAAATTTGTTTGAAAAGTCTGCCTTGGTTGACGTTGCAGACACTAAGGCAAAAAGAGTAGCAGCAGAAGGTAACCCATTCCTTGCTGCTCCTTTGAAAATTGAGGACAAGGAAATTGCTTCTGTTCCCCCTCCAGCCAAGTTTTTTAATGATGTAGTTCTTGATAATCCTGTTGTGGAAAATTTCGTTCAAAGTGAACCAATTTCAGCATTGGAGACATTTGCTCCCGCAATTGAAGCAATGAAAAACACATGCTGTGATTCTAAGGAAGACCAGACAAAAAAATTTGTGAATGAGAAGCCTACTGTGCGTTTTAAGATTGGGATTAAAAACAAATTATTAGGAAGGTCCATTGGTTTTATCCCTCAAACAGAGGAGCATAACAAGACGTTGCCATGGTTTGCGATGGAAGATGAGAAGGATGACATGAAAAGGAGGGCTGAGAAAATTCTGAGGGAATCCTTGGAAAACCCAGATCAGCTTGTTCAGTTGTAA 1146 0.4546 MSNGGGKTGRQLEQPGTWRRRKVGGGDDFARAIAKIAVAQVCESEGFQAFQQSALDALSDVVVRYILNVGKSAHCHANLSGRTESNAFDVIQGLEDMGSVQGFAGASEVDHCLESSGVIREIFHFVNEGEPVVFAHPIPRFPVVKERVLNPSFLQKGEEPPGDHIPAWLPAFPDPQNSSQSPVVNGRGTEPRAVKFEQERENGKGEWPVLNLKQQMVSNLFEKSALVDVADTKAKRVAAEGNPFLAAPLKIEDKEIASVPPPAKFFNDVVLDNPVVENFVQSEPISALETFAPAIEAMKNTCCDSKEDQTKKFVNEKPTVRFKIGIKNKLLGRSIGFIPQTEEHNKTLPWFAMEDEKDDMKRRAEKILRESLENPDQLVQL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1237 381 Gene3D Histone, subunit A 26 108 IPR009072 GO:0046982
Pvu11g1237 381 Pfam Transcription factor TFIID complex subunit 8 C-term 164 207 IPR019473 -
Pvu11g1237 381 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8 1 380 IPR037818 GO:0005669
Pvu11g1237 381 PANTHER BROMODOMAIN TRANSCRIPTION FACTOR 1 380 - -
Pvu11g1237 381 CDD TAF8 163 215 IPR019473 -
Pvu11g1237 381 SMART 17neu3 27 103 IPR006565 -
Pvu11g1237 381 MobiDBLite consensus disorder prediction 1 23 - -
Pvu11g1237 381 Pfam Bromodomain associated 28 98 IPR006565 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1237 Pvu-Chr11 21104093 21106182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1237 K14649 - gmx:100815889 693.73