Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1232 ATGGATCAATTATATGAAGAGGTTGAAGAACCAGTGAGTCCCCCTGGACAATATTTCAACAGTTCAGTGATATGTTCCTATGTTTTTGGCTTTCTTGAAATAGCAATTCCAATTGATGACTCAAAGACCGTATCTTTGATCAAAGATGTCTTCCTCCCTATCAACCCACGTTTCTCCTCTATCATGATAAGAGACCAAGATGGTAAAAGGAGATGGAGAAGGGTAGAAGTGAAGCCTGAAGAGCATGTAAAGATTCCCAAATTTCCAGAAGGCAATTCACCTGAATTATATGACCATTATTTCGATGACTATGTGACAACGATTCTAACTGAAAGAACACCACAGAACAAACCACTGTGGGAAATCCATATTATTAAGTATCCCACGAGCAATGCTGCAGGCACAATAATTTTCAAGCTTCATCATGCTCTTGGAGATGGTTACTCCTTAATGGGTGCCCTTCTTTCTTGCCTTCAAAGAATTGATGACCCTTCTCTTCCACTAACTTTTCCTTCAAGAACATCATCAAGTTCACAAGGTTCAAAGAAAAACATGTTTCAGAAGTTACCTTCAGTTATCTCCTCCTTTTTTAGCTCCATGTCAGATTTTGGATCAAGCTTAGTGAAGACAACAATGGATGTAGATGAGAAAACACCTGTAAGATCTGGATATGAAGGAACTGAGTCCATGCCTTTTGCCTTGTCAAACATATCACTATCTCTTGATCATGTCAAAGCAATCAAGACCAAGCTTGGAGTGACCATAAATGATGTGATTACTGGGATGTTTTTCTATGGGATTCGGTTGTACATGCTCGAGATTGACAACATGGCTAGAAAAGCAAAATCCACAGCTGTGGTAATGCTCAACACAAGAAATGTTAAAGGGTACAAATCACTGAAGGAGATGCAAAATTCAAAGGTGAAAGGTCTGTGGGGGAATAAAATTTCTTTCCTACAAATACCTATTCCAAAGCTAAGTCAATCCAGAAGCCACAACCCTCTTGAGTTTGTTTGGAATGCCCGAAAACTAATAAATAAGAAGAAACGTTCTTTCAGTGTTTATCTCATAGGTTTGCTCTTAGATTTGGAGATGAAATTAAAGGGTCCTGAGGCTGTAGCTAAAATCATCTACAAGACTCTTGGAAACTGTAGTGTTGTTATATCCAACATTTTTGGACCAATGGAACAAATGGCTTTGGCAAATAATCCTATAACTGGTTTATATTTCACTATGACTGGTGGACCTGAGAATATAGACATAACTATTATGAGCTATGTGAAAGTACTAAGAATCACCTTGAGAACACTTAAGGGATTCATTGATGAACAGAAACTCAAGTTTTGCATGGAGAAAGCCTTTGATGTGATATTCAAAGCTGCCATGGAGATCTCTCAAACACCCAACTAG 1410 0.383 MDQLYEEVEEPVSPPGQYFNSSVICSYVFGFLEIAIPIDDSKTVSLIKDVFLPINPRFSSIMIRDQDGKRRWRRVEVKPEEHVKIPKFPEGNSPELYDHYFDDYVTTILTERTPQNKPLWEIHIIKYPTSNAAGTIIFKLHHALGDGYSLMGALLSCLQRIDDPSLPLTFPSRTSSSSQGSKKNMFQKLPSVISSFFSSMSDFGSSLVKTTMDVDEKTPVRSGYEGTESMPFALSNISLSLDHVKAIKTKLGVTINDVITGMFFYGIRLYMLEIDNMARKAKSTAVVMLNTRNVKGYKSLKEMQNSKVKGLWGNKISFLQIPIPKLSQSRSHNPLEFVWNARKLINKKKRSFSVYLIGLLLDLEMKLKGPEAVAKIIYKTLGNCSVVISNIFGPMEQMALANNPITGLYFTMTGGPENIDITIMSYVKVLRITLRTLKGFIDEQKLKFCMEKAFDVIFKAAMEISQTPN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1232 469 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 2 468 IPR045034 GO:0008374|GO:0045017
Pvu11g1232 469 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 101 259 IPR004255 GO:0004144|GO:0045017
Pvu11g1232 469 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 2 468 - -
Pvu11g1232 469 Pfam WS/DGAT C-terminal domain 312 457 IPR009721 GO:0004144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1232 Pvu-Chr11 20061178 20063996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1232 6 434 Acyl Lipid Metabolism Gene Families AT3G49190 27.876 4.05e-54 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1232 - - gmx:100804395 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1232 11 20061178 20063996 Pvu11g1232 11 20061178 20063996 ECH
Pvu5g1065 5 30664838 30669738 Pvu11g1232 11 20061178 20063996 PCT