Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1231 ATGGAGCTCACTATTACGCAGCCTGATGATTGGCATCTTCACCTTCGTGATGGTTCTCTTCTTGAAGCTGTCCTCCCTCACAGTGCTAAGCATTTTGGAAGGGCTATAGTGATGCCAAATTTGAAACCACCCGTCACTACCACATCTGCTGCTGTCACTTATCGAGAGTCCATTTTGAAAGCAATACCTACAGACAGCAACTTCACTCCTCTCATGACACTTTACCTCACAGACTTAACTACGCCTGACGAGATTAAACATGCAAAAAAGAGTGGACTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACTACGAATTCCCAAGATGGTGTTACAGATCTTTTTGGAAATTGTTTTTCTGTTCTCAAGGAAATGGCTGAGCAAAATTTACCATTATTGGTTCACGGAGAGGTTACAAATTCAGAAGTAGATATTTTTGACCGAGAAAAGGTCTTTATTGAAACAATTTTGGAGCCTTTAGTTCAAAGGCTTCCACAACTGAAGGTTGTGATGGAGCATATTACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTACGTAGCTGCAACTGTAACACCACAACATCTTCTTCTTAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCCGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTTACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCACCACATGATAGGCGTAAAAAAGAATGTTCATGTGGATGTGCTGGGATATACAACTCCCCGGTTGCTCTATCACTATATGCTAAGGTTTTTGAAGAGGCCGGTGCACTTGATAAGCTGGAGGCTTTTACAAGCTTTAATGGACCTGACTTCTATGGCCTCCCTAGAAATAAGTCAAAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCTGATTATTTGTCATTTCCATTTGGAGACATTGTTCCCATGTTTGCTGGTGAAACTCTTGAATGGGAGGCATGCCTTGTTGACTTACACGTCGATTTCAAAGTTCGGCATCCTTCAGCTCAAATTACTGATTTCTGA 1095 0.4155 MELTITQPDDWHLHLRDGSLLEAVLPHSAKHFGRAIVMPNLKPPVTTTSAAVTYRESILKAIPTDSNFTPLMTLYLTDLTTPDEIKHAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCFSVLKEMAEQNLPLLVHGEVTNSEVDIFDREKVFIETILEPLVQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRKKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKAPWKVPDYLSFPFGDIVPMFAGETLEWEACLVDLHVDFKVRHPSAQITDF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1231 364 Pfam Amidohydrolase family 10 321 IPR006680 GO:0016787
Pvu11g1231 364 PANTHER DIHYDROOROTASE 1 343 IPR004721 GO:0004151|GO:0019856
Pvu11g1231 364 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Pvu11g1231 364 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Pvu11g1231 364 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Pvu11g1231 364 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Pvu11g1231 364 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
Pvu11g1231 364 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
Pvu11g1231 364 Gene3D - 1 343 - -
Pvu11g1231 364 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1231 Pvu-Chr11 19940924 19945536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1231 K01465 - gmx:100815210 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1231 11 19940924 19945536 Pvu11g1231 11 19940924 19945536 ECH