Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1212 ATGGCGGTTCGGTTCTTTCAGAACCCGATGCCCGAATTCGTACCCGAAGCGACGCCGTCTACTCCGCAGGAACAAGAAGAAGCCCTCACAGTAGGGGACTCACTCCCGAAGCTCCTGGCCATGCCCCACGCGCCACTCTCGGAGCGTCTCAAACGCGCCGCTCTAGACCTCAAAGAAACCATAGTGATAGAAACGTGGGGGGTGTCTTGGCGAAAAGATGGTGACTTTTCTCTCTACTGCGGCGTTCTGGGCACGGCTTTTCTGCTCTTGAAGTCTTACGAAGTGACACGCAACGGGAACGATCTTTCTCTTTGCTCTCAGATTGTGAAGGCTTGCGATGCCGCTTCCGTTCGTTCCAGGGATGTGACCTTCATTTGTGGTCGTGCTGGCGTGTGCTCTCTCGGGGCCGTGGCTGCAAAACACGCCGGGGATGATGAGTCCTTGAGGTACTACATGGCTCAGTTCGAAAAGATTAAGCTGTCAAAAGATCTTCCTGACGAGTTGTTATATGGGAGAGTTGGTTTTCTGTGGGCCTGTTTGTTCCTAAACAAGCACCTTGGTCAGGGGACGGTTCCTTCCAGTTATACAGCTATGGTTGTTGATGAAGTCATTAAAAGTGGAAGGAGGTTGGGTAGGAAGGGGAGATGCCCATTGATGTTTGAATGGTACGGGGAGAAGTATTGGGGTGCTGCGCATGGATTGGCAGGGATTATGCATGTGCTGATGGAAATGGAGTTGAAGCCAGATGAGCTTGAGGATGTTAAGGGAACTCTCAAATACATGATAAGCAATCGCTTTTCCAGTGGAAACTATCCCGCTAGTGAAGATGATAGGAAGAGCGACGTTCTTGTGCATTGGTGTCATGGAGCTCCAGGGATAGCCCTTACACTTGTCAAAGCAGCTAAGGTTTTTGGAGATAAAGAATTCTTGGATGCAGCTATGGAAGCAGGAGAGGTGGTTTGGAATCGTGGTCTGCTTAAGAAAGTTGGGATATGCCATGGTATAAGTGGGAATGCGTATGTGTTTCTGTCACTGTACCAACTTACAGGGAATGTGAAGCATCTATACAGAGCCAAGGCTTTTGCTTGCTTTTTGCTTGACAGAGCTCATAAGCTGATATCTGGAGGTGAAATGCATGGAGGTGATAGACCATATTCATTGTTTGAAGGGCTAGGAGGCATGGCTTATCTTTTCTTGGATATGATCGATCCTTCCCTGTCTAAATTTCCAGCGTATGAACTCTGA 1245 0.4884 MAVRFFQNPMPEFVPEATPSTPQEQEEALTVGDSLPKLLAMPHAPLSERLKRAALDLKETIVIETWGVSWRKDGDFSLYCGVLGTAFLLLKSYEVTRNGNDLSLCSQIVKACDAASVRSRDVTFICGRAGVCSLGAVAAKHAGDDESLRYYMAQFEKIKLSKDLPDELLYGRVGFLWACLFLNKHLGQGTVPSSYTAMVVDEVIKSGRRLGRKGRCPLMFEWYGEKYWGAAHGLAGIMHVLMEMELKPDELEDVKGTLKYMISNRFSSGNYPASEDDRKSDVLVHWCHGAPGIALTLVKAAKVFGDKEFLDAAMEAGEVVWNRGLLKKVGICHGISGNAYVFLSLYQLTGNVKHLYRAKAFACFLLDRAHKLISGGEMHGGDRPYSLFEGLGGMAYLFLDMIDPSLSKFPAYEL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1212 414 PRINTS LanC-like protein superfamily signature 75 93 IPR007822 -
Pvu11g1212 414 PRINTS LanC-like protein superfamily signature 166 181 IPR007822 -
Pvu11g1212 414 PRINTS LanC-like protein superfamily signature 227 243 IPR007822 -
Pvu11g1212 414 PRINTS LanC-like protein superfamily signature 283 303 IPR007822 -
Pvu11g1212 414 PRINTS LanC-like protein superfamily signature 329 342 IPR007822 -
Pvu11g1212 414 PRINTS LanC-like protein superfamily signature 384 401 IPR007822 -
Pvu11g1212 414 SMART LANC_like_2 72 414 IPR007822 -
Pvu11g1212 414 SUPERFAMILY LanC-like 71 414 - -
Pvu11g1212 414 CDD euk_LANCL 78 410 - -
Pvu11g1212 414 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Pvu11g1212 414 PRINTS Eukaryotic LanC-like protein family signature 216 228 IPR020464 -
Pvu11g1212 414 PRINTS Eukaryotic LanC-like protein family signature 262 277 IPR020464 -
Pvu11g1212 414 PRINTS Eukaryotic LanC-like protein family signature 300 321 IPR020464 -
Pvu11g1212 414 PRINTS Eukaryotic LanC-like protein family signature 345 363 IPR020464 -
Pvu11g1212 414 Gene3D - 1 414 IPR012341 GO:0005975
Pvu11g1212 414 PANTHER LANC-LIKE PROTEIN 1 414 - -
Pvu11g1212 414 PANTHER LANC-LIKE PROTEIN GCL2 1 414 - -
Pvu11g1212 414 Pfam Lanthionine synthetase C-like protein 75 414 IPR007822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1212 Pvu-Chr11 18657432 18660432 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1212 - - gmx:100803464 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1212 11 18657432 18660432 Pvu11g1212 11 18657432 18660432 ECH