Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1205 ATGCAAGGAGACAAAGTTCCAGATGTATCAGTCACACAGTGTTGCAATTACAAAACACTTTACTTCCTCTCATTCATTTCTTCTCTGTCTCTTCAATTTCCCTCTTCAAACACCAAAACGGTCAAATTTTCAACATCCCAAAAACTCCACCGTCTTCCATCTTCTTCTTCTTCTTCTTCTTCACACACTCTGAAATTCCACACATTAACACAAATCCAAATCCAACCCATTTTTCTTCCTTCATCTCCTTCACTTTCCGATCACTCTCCCACAATGTCCACATCAAACAGCCTTGTTCTTCCGCTCCTCCTCCTACTGGGTCTCTCGCCGCTCTTCGAAGCCGCCAACGGCGGCACTCCGCCGCAGGAGCTGTGGTGTGTGGCGAAGAACAACGCAGAGGACGCGTCGCTGCAGGTCGCGCTCGACTGGGCCTGCGGTGCCGGCGGCGCGGACTGCGGCCCAATCCAAAACGGTGGGCCCTGCTACGACCCTAGCAGCGTGCAGAATACGGCGTCGTTTGCCTTCAACGACTATTTTCTCAAACACGGCATGACTGACGATAGCTGCAACTTCAACAACAACGCTGCCGTCACTTCCCAGAACCCTAGTTTTGGCAACTGCAAGTTCCACTCCGGCATGACGGGGAGCAATGGGAGTTTTTCTGGATCGACGCCTTCTTCTTCTGTTGGATTGGGACCAAGTGAAGATTTGAGTGGGTGCAGGAAAGTTTCCTGGGGGTGGTGGTTATGGCCTTTGATGTTTATGGTTTCTGTTTTTTGA 780 0.5038 MQGDKVPDVSVTQCCNYKTLYFLSFISSLSLQFPSSNTKTVKFSTSQKLHRLPSSSSSSSSHTLKFHTLTQIQIQPIFLPSSPSLSDHSPTMSTSNSLVLPLLLLLGLSPLFEAANGGTPPQELWCVAKNNAEDASLQVALDWACGAGGADCGPIQNGGPCYDPSSVQNTASFAFNDYFLKHGMTDDSCNFNNNAAVTSQNPSFGNCKFHSGMTGSNGSFSGSTPSSSVGLGPSEDLSGCRKVSWGWWLWPLMFMVSVF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1205 259 PANTHER BETA-1,3 GLUCANASE 119 248 IPR044788 -
Pvu11g1205 259 Gene3D - 121 217 - -
Pvu11g1205 259 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 5 119 248 - -
Pvu11g1205 259 SMART X8_cls 124 209 IPR012946 -
Pvu11g1205 259 Pfam X8 domain 124 195 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1205 Pvu-Chr11 18420395 18421932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1205 125 212 Glycoside Hydrolase AT2G05790 51.136 1.07e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1205 - - pvu:PHAVU_011G117000g 454.136