Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g1183 | ATGGAAGAATCCGTGAAGAAAGGCACTGTGACCTCACTGGCGTCCCTGTTCCCAGTAGAGGAGGCGCAGAAGGCGGCGAAGCGCGTCGAAGAAGCCATTGCCGGCAAGCACAGCGAGCTCGATTGCGTACGAGGTTTCATCGCCGACAATAACAACCTCGTCAACCTTGTCCACAAACTACCTGAAGAACTCTCCCACGATATCATGGTTCCGTTTGGCAAAGCAGCGTTCTTCCCTGGTCGTTTGATTCATACCAATGAGTTCCTGGTTCTTTTGGGAGAAGGGTATTATGCAGAGAGAACTTCGAAACAAACAGTTGATATTTTGCAGCGAAGAGGGAAGTCCTTGGATTCGCAGGTTGATTCCCTTGAGGCTAATATCAAGGACCTTGAAGCAGAGGCTTCGTTTTTCAATGCCACAGCTTCTCAAGTAGCGGAGGGTCTTGTGGAGATAAGGGAAGATTATGTGGAGAAAGACTTTAATGAAGGGGAATCCAAATCAGGCATGTTCTAG | 513 | 0.4873 | MEESVKKGTVTSLASLFPVEEAQKAAKRVEEAIAGKHSELDCVRGFIADNNNLVNLVHKLPEELSHDIMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDILQRRGKSLDSQVDSLEANIKDLEAEASFFNATASQVAEGLVEIREDYVEKDFNEGESKSGMF* | 171 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1183 | 170 | Coils | Coil | 106 | 140 | - | - | |
| Pvu11g1183 | 170 | Coils | Coil | 19 | 39 | - | - | |
| Pvu11g1183 | 170 | Pfam | Prefoldin subunit | 30 | 145 | IPR004127 | - | |
| Pvu11g1183 | 170 | PANTHER | RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 | 1 | 165 | - | - | |
| Pvu11g1183 | 170 | Gene3D | - | 19 | 149 | IPR009053 | - | |
| Pvu11g1183 | 170 | TIGRFAM | TIGR00293: prefoldin, alpha subunit | 23 | 145 | IPR004127 | - | |
| Pvu11g1183 | 170 | CDD | Prefoldin_alpha | 19 | 145 | - | - | |
| Pvu11g1183 | 170 | SUPERFAMILY | Prefoldin | 20 | 139 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu11g1183 | K17560 | - | pvu:PHAVU_011G115000g | 332.798 |