Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1172 ATGGCCAAGACTAGGTGGGTGTGCCATCTTCTGCTAAGGTTCTTGGCTTTTGCAGCAACCCTTTCAGCAGTCATTATGATGGCTACTAGCCATGACACAGTTACCATCTTCACAGTGTCCTTTGAAGCAAAATACACCAATTCCCCTGCCTTCAAGTACTTTGTCATTGCATACTCTGTTATCACTGTCTATGGATTTTTTGTGCTCTTTCTTCCTGCAAAAAGCTTGCTATGGCAACTTGTGGTAGCCTTGGATTTGGTGTTCACCATTCTACTTGTCTCAAGCCTCTCTGCAGCTGTGGCCATAGCTCAGGTGGGAAAGAAAGGAAACAATTATGCAGGTTGGCTACCGATATGTGATTCAGTTCCCAAATATTGTGATGAAGCCACAAGAGCTTTAATCGCTGGTTTCATTGCAATGATTATATACATAATTCTTCTTCTGCATTCCATTCATACCATCATAGACCCTCTCCTCTTGAGAAAAAACTGA 492 0.4248 MAKTRWVCHLLLRFLAFAATLSAVIMMATSHDTVTIFTVSFEAKYTNSPAFKYFVIAYSVITVYGFFVLFLPAKSLLWQLVVALDLVFTILLVSSLSAAVAIAQVGKKGNNYAGWLPICDSVPKYCDEATRALIAGFIAMIIYIILLLHSIHTIIDPLLLRKN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1172 163 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 10 153 IPR006459 -
Pvu11g1172 163 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 2 161 - -
Pvu11g1172 163 PANTHER CASP-LIKE PROTEIN 1C1 2 161 - -
Pvu11g1172 163 Pfam Casparian strip membrane protein domain 5 141 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1172 Pvu-Chr11 15404868 15406131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1172 - - gmx:100809698 263.462