Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1156 ATGGCTTCCCAACACGAAGACGGGTTCAATGTCGACCCGATTCTTATTGGGGTAGATACAACAACGGCTTCTCAACACGAGAATCGGTTGGATATTGACCCGAATCCAATTGGGGTGGAGACCCAGGAAGCGGAGACGGAAAAGTTGGCGACTTTGGGTTGTGTTGCTCCTATTGAGGAAGCTGTGGAGAAGATCAATTTGTTGGGTTCTTCTCTTTCTATTGAGGAGAACGGTGATAAGGATGATACAGGAAGTGATAGTGATAGTGAAAGCGGAAGTGAAAATTCTGGGTCTGAAAGTCCTGATTCTGGTAGTGAAAGTAGTAGTAGCAGCAGCAGTAGCAGCAGTAGTAGTAGCAGCAGTAGCAGTAGTGATAGCGAAGAGGAGAGTGATGATGACAAAGAGGTAGAAGTTGAAGAAGGCGAGATAAGTAGCTCCGATGAAGAAAAGATGGCTAGTTGGAGCATGGTTGATGCTGATGGTGATCATGATGAGGAAGATGGTGATGCTGGAGTTGGACCCATCAGGTCAAAGAACGAGCTTCAGAATCTGCCCGCTGTTCCTCCTGTCAATGCTGCTTTAGAACCACACCATCAAATGTTGCCAGTGGGAATCATTACTTCTACTCTTGGTGCTCAAGTCGTTGTGGAAGGAGTGGAGAAGCATGACCCTCTTAATGAGGGTTCTATTCTTTGGTTGACTGAAAGCCGAAAACCACTAGGTTTAATTGATGAAATCTTTGGACCAGTCAAGAACCCTTATTATGTTGTGAGATACAATTCTGAAAGTGAAGTTCCTACAGGGATCAATGAGGGAACCTTGATCTCGTTTGTTCCAGAATTTGCTGATCATGTGCTTAATAACCAGGATCTTTATAGGAAAGGGTACGATGCATCTGGTGCGAATGATGAAGAGTTATCTGACGAAATGGAGTTTTCAGATGATGAAAAAGAGGCTGAACACAAGAGAATGCATAGAACGACAAAAAGAGGTGTAAATGATCAAAATCATGCCAAGAAAAAAAACAACAGAAAGAAATTTTCACCTAAAGAGCATGTGGCACCAACCATCCCTGACGCACCTGCTGCACCTTTGCTTACTCACGGAAATTGTCCTCCTTTTCCAAGTATTGGACAAACTCTTTTGGGGGGAACTGCCACAGTTCCATCATTTCCCCACTTAAACGCAGCGCCCCCCAACTTTGCTACAAATGGAGTTTGGACAAACGGAGCATTTCCACAGCACCCACAGAATGCCATGTTTCCTAATGGTTTTCCTGCAAATGGCCTATCATGGTTCCCACAAAACACTCAAATTCCTCCCCAGCTGCCAATGCCAGGAATTCCATTTCAACAGCAATTACATGGCAATCAGGGATCTCTTTCCACAACTATGCTACCTGGGATGCAGCCCAATATGTTTGCTCAATCCATATATGCAACAGGGCTTGTTGGTCAAAACCAAATGGCATTTGGGATGGGATCACCCTTCCAACAGATTCAGCCACCTGCACAACAGGGATTTCCATCCAATTCTGGTGCCCCCCCTCAGTTTCATCCACGTCCATCTGGTAATCGTGGTAGAAAAACATTTCATGGTGCAGGAAGGAAAGGGTGGCGACCAGCCAAGTGA 1632 0.4522 MASQHEDGFNVDPILIGVDTTTASQHENRLDIDPNPIGVETQEAETEKLATLGCVAPIEEAVEKINLLGSSLSIEENGDKDDTGSDSDSESGSENSGSESPDSGSESSSSSSSSSSSSSSSSSSDSEEESDDDKEVEVEEGEISSSDEEKMASWSMVDADGDHDEEDGDAGVGPIRSKNELQNLPAVPPVNAALEPHHQMLPVGIITSTLGAQVVVEGVEKHDPLNEGSILWLTESRKPLGLIDEIFGPVKNPYYVVRYNSESEVPTGINEGTLISFVPEFADHVLNNQDLYRKGYDASGANDEELSDEMEFSDDEKEAEHKRMHRTTKRGVNDQNHAKKKNNRKKFSPKEHVAPTIPDAPAAPLLTHGNCPPFPSIGQTLLGGTATVPSFPHLNAAPPNFATNGVWTNGAFPQHPQNAMFPNGFPANGLSWFPQNTQIPPQLPMPGIPFQQQLHGNQGSLSTTMLPGMQPNMFAQSIYATGLVGQNQMAFGMGSPFQQIQPPAQQGFPSNSGAPPQFHPRPSGNRGRKTFHGAGRKGWRPAK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1156 543 MobiDBLite consensus disorder prediction 89 124 - -
Pvu11g1156 543 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 38 536 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Pvu11g1156 543 MobiDBLite consensus disorder prediction 125 144 - -
Pvu11g1156 543 Gene3D Probable tRNA pseudouridine synthase domain 172 278 IPR038664 -
Pvu11g1156 543 MobiDBLite consensus disorder prediction 496 513 - -
Pvu11g1156 543 MobiDBLite consensus disorder prediction 496 543 - -
Pvu11g1156 543 MobiDBLite consensus disorder prediction 299 361 - -
Pvu11g1156 543 Pfam Gar1/Naf1 RNA binding region 202 282 IPR007504 GO:0001522|GO:0042254
Pvu11g1156 543 MobiDBLite consensus disorder prediction 73 152 - -
Pvu11g1156 543 SUPERFAMILY Translation proteins 200 263 IPR009000 -
Pvu11g1156 543 MobiDBLite consensus disorder prediction 315 338 - -
Pvu11g1156 543 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 38 536 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1156 K14763 - gmx:102661630 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1156 11 14755711 14758570 Pvu11g1156 11 14755711 14758570 ECH