Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1134 ATGTCAATTAGGTATTATATATATAGTATAGTAGGCATGTTTATGCATCTGTTTAATGGGTTTTCCGTGAAAAGATCATTACTTAGCAAAGAGGTTGATACGAGAGAAGAATCTAAGGCAGCCATGGAGAACAGTGAGCCTCCAAGGCGTCTTGAGGGAAAATATGCTGCAATAGTAGTCTGCTGGTTTCTTGGCAATGGGTGCCTTTTCTCATGGAACAGTATGCTGACTATAGAAGATTACTATGTTCACTTGTTTCCGAAATACCACCCCTCTAGGGTGCTTACTCTTGTATATCAGCCATTTGCAGTTGGAACACTAGCAATACTGGCTTACAAAGAGGACAAAATCAATACAAGAATAAGAAACCTATTTGGATATACTCTTTTCTTCATAAGCACTTTGTCGGTGTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGACTTGGGACTTTTATTGGTATATGCATAATTAGTGGTGCATTTGGAATAGCAGATGCTCACACGCAAGGTGGAATGGTGGGAGACCTATCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTTTAGCAGCATCTGGTGCACTAACATCTGCTTTGAGGTTGATTACAAAAGCAGCATTTGAGAATTCTAAGAATGGTCTTCACAAAGGAGCCATTACGTTCTTTGTCATATCAACATTCTTTGAGCTTCTTTGTTTTCTTCTATATGCATTTGTCTTTCCTAAATTACCAATCGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACTGTTTCATCTGATCTTGCTGCAGGTGGTATCCAGACCCCATCTCGAAGAGTCAATGAAGATGACAAACGATTAGAGCGCAAAGGGAATAAGCAACTGTTATTAGAAAACATTGATTATGCACTTGATCTGTTCCTAATATACGCACTTACACTATCAATTTTCCCCGGATTCTTATCAGAAGATACCGGATCACACAGTTTGGGCACATGGTATTCTCTTGTGTTAATTGCTATGTACAATGTGTGTGATCTGATCGGAAGATACATTCCACTCTTGAAAACCCTGAAGTTGGAGTCCCGAAAAATGCTCACCACAGTCATTGTTAGTCGCCTTTTGTTTGTGCCAGCATTTTATTTTACTGCAAAGTATGGTTCACAGGGGTGGATGATAATGTTGACATGCTTTTTGGGGTTATCCAATGGTTACCTCACTGTTTGTGTTCTCACTTCAGCACCCAAAGGTTACAAGGGACCAGAACAGAATGCCTTGGGAAACTTGTTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGTGTAACACTTGACTGGTTGTGGTTAATAGGGAAAGGGTGGTGA 1368 0.4006 MSIRYYIYSIVGMFMHLFNGFSVKRSLLSKEVDTREESKAAMENSEPPRRLEGKYAAIVVCWFLGNGCLFSWNSMLTIEDYYVHLFPKYHPSRVLTLVYQPFAVGTLAILAYKEDKINTRIRNLFGYTLFFISTLSVLILDLATSGKGGLGTFIGICIISGAFGIADAHTQGGMVGDLSYMLPEFIQSFLAGLAASGALTSALRLITKAAFENSKNGLHKGAITFFVISTFFELLCFLLYAFVFPKLPIVKYYRSKAASEGSKTVSSDLAAGGIQTPSRRVNEDDKRLERKGNKQLLLENIDYALDLFLIYALTLSIFPGFLSEDTGSHSLGTWYSLVLIAMYNVCDLIGRYIPLLKTLKLESRKMLTTVIVSRLLFVPAFYFTAKYGSQGWMIMLTCFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1134 455 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 42 454 IPR030200 -
Pvu11g1134 455 PIRSF ENT 24 453 IPR002259 GO:0005337|GO:0016021|GO:1901642
Pvu11g1134 455 SUPERFAMILY MFS general substrate transporter 189 448 IPR036259 -
Pvu11g1134 455 Pfam Nucleoside transporter 164 449 IPR002259 GO:0005337|GO:0016021|GO:1901642
Pvu11g1134 455 SUPERFAMILY MFS general substrate transporter 5 247 IPR036259 -
Pvu11g1134 455 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 42 454 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1134 Pvu-Chr11 14190043 14193584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1134 44 453 Organic Solute Cotransporters AT4G05120 69.024 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1134 K15014 - gmx:100784933 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1134 11 14190043 14193584 Pvu11g1134 11 14190043 14193584 ECH
Pvu5g1132 5 31905455 31909909 Pvu11g1134 11 14190043 14193584 PCT