Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g1133 | ATGCAGTGTTTTCCTGGAGCGTGTTCTGTCAAATTGAATTACGTTCGGCTGCTATCTGAATGTCATAATCCATTTTGCATATCCTGTATTAGGAATTGGCGTAGTAGTAACCCAACATTGGGGATGGATGTTAATAGTACATTGAGGGCTTGTCCTATTTGTCGTAAGCTATCATACTTTGTGATCCCAAGTGTCATTTGGTACTCGACAACTGAAGAGAAACAAGAAATCATTGACAACTACAAGGCCAAGCTCAAGTCAATTGACTGCAAGCACTCTGACTTTGGGGATGGTAACTGCCCTTTTGGAACTAGTTATTTCTACAAGGTATGGCGGAAGGAGATTCGGAGCAACAAACACAGTCTGATCAATAGAGCCAATCGGTGA | 387 | 0.4186 | MQCFPGACSVKLNYVRLLSECHNPFCISCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVIPSVIWYSTTEEKQEIIDNYKAKLKSIDCKHSDFGDGNCPFGTSYFYKVWRKEIRSNKHSLINRANR* | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1133 | 128 | PANTHER | MAKORIN-RELATED | 16 | 110 | IPR045072 | - | |
| Pvu11g1133 | 128 | PANTHER | MAKORIN RING-ZINC-FINGER PROTEIN | 16 | 110 | - | - | |
| Pvu11g1133 | 128 | SMART | ring_2 | 8 | 54 | IPR001841 | - | |
| Pvu11g1133 | 128 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 94 | IPR013083 | - | |
| Pvu11g1133 | 128 | SUPERFAMILY | RING/U-box | 13 | 61 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g1133 | Pvu-Chr11 | 14169429 | 14172016 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu11g1133 | K15687 | - | pvu:PHAVU_011G110100g | 278.485 |