Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1122 ATGGAGAAGGGGTTAATCTCCGTAGACCGTTGGGCAAAAGGAAGCGAAGCTTACTTCCTCTCCCACCTCCACTCCGACCACACCAACGGCCTCACCTCCTCGTGGTCTCACGCGCCCCTCTTCTGCTCCCCCGTTACCGCCAAACTCCTCCCCTTCAAGTTCTACGGCTTCGATCTCTCCCTCCTCCGCATCCTCCACCCCGACGCCTCCCACACTCTCACCCTCAAATCCACCGTTATCCACGTCACCGCCATCGACGCCTGTCACTGCCCCGGTTCCATCATGCTCCTCTTCCGCGGCGACTTCGGCTGCGTCCTCTACACAGGCGACTTCAGGTGGGAAGCCACGTGCCAGAGAGCAACCAACGCGCGCCACTTGCTTCGCAACGCTCTTCACGACGTTCCTGTGGTTGACGTCGTTTATCTCGACAACACCTACTCCAATCCTATCTATGATTTTCCTACTCGCCATGTGGCGGCTCAGAAGGTTATAGATATAATTTCTTCGCATCCCGATCATGAGGTCATTATCGGGATTAACACTTTGGGGAAGGAAGATCTTCTGATCGAAATTGCGCGCGCGCTTCAAATCAAGATTTGGGTGTGGCCAGAGCGGTTGCGGACTATGCATCTTCTTGGTTTCTATGATATTTTTACAACGGACACGTCTCTTACTAGAGTTAGAGCTGTTCCTCAATATAGCTTTAGCATTGGAACTCTAGAGTCACTGAATAGAATGTGCCCAACTATTGGGATCTTGCCATCGGGTCTTCCGTGGATTAAAAAATCCCTTCAAAAGAATGAGTTTCTTTCTGGTTCCTTTTTGACACGTCGTTATAAGAGAGGCAAATGGAGTGCAAATAGCGAGGCCCAGAGTGATGACCAAATTAGAAACATAGGATCACCCGAGAAAATTCACGAGTACATGTACACAGTTCCCTACTCTGATCACTCCAATTATGAGGAGATTGAAGAGTTTCTAAAGCTTGTTCAACCAACCAGACTCAAGGGCATTGTGGCTTCCTCGTCATGCTATATTGAACCCATGTACTACTTTGGTCGACTTTGTCGTGTCGACCAACAGACACAAAAGTTGCATGAGGAGCAGAGAAGGAAAGAAAGTTGTAAAAGAGAAATAGAAGCAGTCAGATCCAAAACTTCATTTGGAGGTGATAATGTTCAGACAGGTAGAGACAGAAGTAAGGCTTCGAAGGGTAGGTCTTCTGGTGTTCGTCTGAGAAGGTTTAGTAGATTGAGAAGAACGCACCGTGGTGCAAAAATTCAGGGAGATAACTGTTCTGATCAAGAATGA 1311 0.4844 MEKGLISVDRWAKGSEAYFLSHLHSDHTNGLTSSWSHAPLFCSPVTAKLLPFKFYGFDLSLLRILHPDASHTLTLKSTVIHVTAIDACHCPGSIMLLFRGDFGCVLYTGDFRWEATCQRATNARHLLRNALHDVPVVDVVYLDNTYSNPIYDFPTRHVAAQKVIDIISSHPDHEVIIGINTLGKEDLLIEIARALQIKIWVWPERLRTMHLLGFYDIFTTDTSLTRVRAVPQYSFSIGTLESLNRMCPTIGILPSGLPWIKKSLQKNEFLSGSFLTRRYKRGKWSANSEAQSDDQIRNIGSPEKIHEYMYTVPYSDHSNYEEIEEFLKLVQPTRLKGIVASSSCYIEPMYYFGRLCRVDQQTQKLHEEQRRKESCKREIEAVRSKTSFGGDNVQTGRDRSKASKGRSSGVRLRRFSRLRRTHRGAKIQGDNCSDQE* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1122 436 Coils Coil 358 385 - -
Pvu11g1122 436 PANTHER PROTEIN ARTEMIS 5 405 - -
Pvu11g1122 436 Gene3D - 5 337 IPR036866 -
Pvu11g1122 436 Gene3D - 152 317 - -
Pvu11g1122 436 MobiDBLite consensus disorder prediction 386 415 - -
Pvu11g1122 436 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 405 - -
Pvu11g1122 436 Pfam DNA repair metallo-beta-lactamase 218 334 IPR011084 -
Pvu11g1122 436 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 335 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1122 Pvu-Chr11 13289993 13292492 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1122 K15341 - gmx:100775842 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1122 11 13289993 13292492 Pvu11g1122 11 13289993 13292492 ECH