Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1121 ATGTTTAGATTTTCTTGTTTCCATGCTAATGTCCAAGGCAATAAGGCAAAGAAAACAGTTCAACCTTCTGCTGAAGTAATGTTGAAGGCTTTGCAAGATGTTGCCCAAACTCAAGTCTGTAAAGATTCATCTCCAAGCGCATATTCAACCCTTTCGAAAGGACAAGCAGACCAGCAAATAGATGTGTCTGGGATTCATATTAGCAATTGGGATTCAGTTGAGCGCAGTTGTAGATCAGAGGATCTGAACAGCAAGTTTTCCTTTGAAAATGACAGTCAAGTTAACCAAACTAGACGTCTTAAGAAGAGTCAGTCTCTTCATAGTGGGCTTGACCAAGGCATAAGGGATGGTGATGAAGATCTGGTCCTGTCGTGTGATGGTGCCAAAAGCCACGTTGAGTCAACGATGTCAACTTCCAAAAAGTATCATAATGGAAACCCTGTTGATCAGTATGGAAGCAATCGAAACGCTGAGTTCGCTGGAAGTTCAGGTTTTGCAAATGATAGCTCACTTTTTTCAATTGGAGATCCAACGCCTTCAGATAAAGATGCCCGTGAAATTTCTGATACTCCTTTATCTGGTGAATATGTTGGTGACATTCCTGACCAGACTTCTGTTCCCGGTAGCGTATCACTAAGGAAGTCACATTCTTTACCCAGTATCAGAGCTTCTATACTATTGACTGAAAAAGACGCTTTTAAACATGAATTGTCAAGATCTTCTGATGATCTTCATGCTTTACGCATGAGGCAGAAAGAGGAATTCGTCAACGAGTTTGATGATCAAATAAGGGGAGATCAAGAAAGAGAGAATGACATGGGAAAAACTGAAGATGGTCATATGGACAACCTCTTTGATGATGGTTTCGATTCTTATCTGCTTACTGATTCAGCAAAAGACTGGGTAATGCCAATGACATATGATACAAGTGATGCCAAAACCCTTCAAGGAGATTCCTCAGTTGAATTTCCTCACAAGGGTTTTAAGATTAAGCGCATTGAAGATTGGGTTATTGGTCTGCAACATTGTGGACCACCTGTAGAGGAAACAAATGAGGAATTGCCTGAAGTTACTAAGCCATTAGCTGATGTGAGCACAGTAAATGGTGTGACTGCTGCCATTGTAGATCATAAGGCCACTCCAGGAATGGATGCAGCTAAAAGATATATATCTTCTCTGGGGGCTAATGCCACTGCCGCTCAGCTGGCTAATCATGGGTTGGTTGTGATCCCCTTTTTGAGTGCATTTGTGAGTTTGAAAGTGCTCAATTTGTCTGGAAATGCTATCGTGAGGATAACTGCTGGTGCTCTTCCCCGTGGACTTCACGCTCTGAATTTGTCTAGAAACAAGATCTCCACTATTGAAGGATTACGCGAACTTACACGGCTTCGCGTCCTAGACCTCAGTTACAACCGCATATTAAGAATTGGACATGGTCTTGCATCCTGCTCATCTCTGAAAGAGCTGTACCTGGCTGGAAACAAGATCAGCGAAGTAGAGGGTCTGCACCGTCTCTTGAAACTAAGCATTCTGGATTTCCGTTTTAACAAGATTTCCACAGCCAAATGCCTAGGCCAACTTGCAGCCAACTATAACTCTTTGCAAGCTATCAACTTGGATGGGAACCCTGCCCAGAAAAATGTTGGAGATGAACAGATGAAGAAATATCTGCAGGGTCTTCTTCCCCATCTCGTTTACTACAATCGGCAGCCTATCAAAGTGAGCACTTTGAAGGATGGAGCAGAACGGTCGGTTCGGTTAGGAATGAATTCCCATCAGTTTGATCGCAGCCTTAGGTCGGATCGCAAGACCACAAGGAAGAGCAACCAAGGTGGTGTTGCCTCTCGGAGGTCATTGGCCACTTCCACTCATGCTCGCAGAAATGTGGATTCACCAAAAGTATCCAGAGGCAAGCAAGCTCTCCTGCCACCATCTAGAACCAAAGTACCAACCCACAGTCGCTATCAGTTTGAGGTTCCCTCCAATCCCTCTAAAGTATTGAACTTGACATCAGAGCGCGCCATGCGCAAGAGTCGCAGCGAGGGAAATTTTGGAGCTCTGTGA 2064 0.4394 MFRFSCFHANVQGNKAKKTVQPSAEVMLKALQDVAQTQVCKDSSPSAYSTLSKGQADQQIDVSGIHISNWDSVERSCRSEDLNSKFSFENDSQVNQTRRLKKSQSLHSGLDQGIRDGDEDLVLSCDGAKSHVESTMSTSKKYHNGNPVDQYGSNRNAEFAGSSGFANDSSLFSIGDPTPSDKDAREISDTPLSGEYVGDIPDQTSVPGSVSLRKSHSLPSIRASILLTEKDAFKHELSRSSDDLHALRMRQKEEFVNEFDDQIRGDQERENDMGKTEDGHMDNLFDDGFDSYLLTDSAKDWVMPMTYDTSDAKTLQGDSSVEFPHKGFKIKRIEDWVIGLQHCGPPVEETNEELPEVTKPLADVSTVNGVTAAIVDHKATPGMDAAKRYISSLGANATAAQLANHGLVVIPFLSAFVSLKVLNLSGNAIVRITAGALPRGLHALNLSRNKISTIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLSILDFRFNKISTAKCLGQLAANYNSLQAINLDGNPAQKNVGDEQMKKYLQGLLPHLVYYNRQPIKVSTLKDGAERSVRLGMNSHQFDRSLRSDRKTTRKSNQGGVASRRSLATSTHARRNVDSPKVSRGKQALLPPSRTKVPTHSRYQFEVPSNPSKVLNLTSERAMRKSRSEGNFGAL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1121 687 MobiDBLite consensus disorder prediction 607 628 - -
Pvu11g1121 687 PANTHER BNAA09G01440D PROTEIN 52 686 - -
Pvu11g1121 687 MobiDBLite consensus disorder prediction 134 176 - -
Pvu11g1121 687 Gene3D Ribonuclease Inhibitor 372 556 IPR032675 -
Pvu11g1121 687 ProSiteProfiles Leucine-rich repeat profile. 485 506 IPR001611 GO:0005515
Pvu11g1121 687 MobiDBLite consensus disorder prediction 588 653 - -
Pvu11g1121 687 Pfam Leucine rich repeat 418 473 IPR001611 GO:0005515
Pvu11g1121 687 SMART LRR_sd22_2 483 504 - -
Pvu11g1121 687 SMART LRR_sd22_2 505 529 - -
Pvu11g1121 687 SMART LRR_sd22_2 438 459 - -
Pvu11g1121 687 SMART LRR_sd22_2 460 482 - -
Pvu11g1121 687 ProSiteProfiles Leucine-rich repeat profile. 462 484 IPR001611 GO:0005515
Pvu11g1121 687 PANTHER NISCHARIN RELATED 52 686 - -
Pvu11g1121 687 SMART LRR_typ_2 484 508 IPR003591 -
Pvu11g1121 687 SMART LRR_typ_2 460 483 IPR003591 -
Pvu11g1121 687 SMART LRR_typ_2 416 439 IPR003591 -
Pvu11g1121 687 MobiDBLite consensus disorder prediction 134 212 - -
Pvu11g1121 687 SUPERFAMILY Outer arm dynein light chain 1 409 573 - -
Pvu11g1121 687 ProSiteProfiles Leucine-rich repeat profile. 440 461 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1121 Pvu-Chr11 13281151 13285289 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1121 - - gmx:100790061 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1121 11 13281151 13285289 Pvu11g1121 11 13281151 13285289 ECH