Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1118 ATGGCTGGAATTGCCTTTGAGGACTTGCTTCCTGTCATGGCCACCAAGCTTGGTGGGGAGGGGCTTATGAAGGAGCTCTGCAACGGGTTTGAGCTGCTGGTGGACAAAGAAAAAGGGGTGATCACGTTGGAGAGTTTGAGGGAGAAAGCTGCACTTTTGGGGCTGCAGGACTTGAAGGAGGATGAACTTGTGAGCATGATGAGGGAAGGGGATCTTGATGGAGATGGGGCACTCACCCAGATGGAGTTTTGCGTTTTGATGTTCAGGTTGAGCCCTGAGTTGATGGAGGAGTCCTGGTTTTGGCTTGAAGAGGCTCTCCAACATGAACAACTCAACCACCACAACACCACCACCAATAACAAATCTTCCATTTAG 375 0.504 MAGIAFEDLLPVMATKLGGEGLMKELCNGFELLVDKEKGVITLESLREKAALLGLQDLKEDELVSMMREGDLDGDGALTQMEFCVLMFRLSPELMEESWFWLEEALQHEQLNHHNTTTNNKSSI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1118 124 Pfam EF-hand domain pair 37 89 IPR002048 GO:0005509
Pvu11g1118 124 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
Pvu11g1118 124 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
Pvu11g1118 124 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 3 112 - -
Pvu11g1118 124 Gene3D - 4 119 - -
Pvu11g1118 124 PANTHER CALCIUM-BINDING PROTEIN KIC 3 112 IPR044205 GO:0005509
Pvu11g1118 124 SMART efh_1 62 90 IPR002048 GO:0005509
Pvu11g1118 124 SUPERFAMILY EF-hand 23 102 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1118 Pvu-Chr11 13215319 13215693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1118 6 113 EF-hand Containing Proteins AT5G54490 61.468 8.08e-43 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1118 K24345 - gmx:100527206 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1118 11 13215319 13215693 Pvu11g1118 11 13215319 13215693 ECH