Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1116 ATGGGAGAATTAGAACAATCTTGCAAGAAGCTGGTCATAAAAATTTATTCTTCATGTCCTCAAAAGTGTGAAGGTGTATGTGAATTGAAGAATAAGAAGGGTTACGCAAAAACAATATGGGTTGATACAAAAATTCCATTACAATCTGGTGCCAGAAATCAAGAAATTAGGTACAAGGGGTGTGATGAGAGAAAGAAGAAAGAAAGATTGCGCATGGAGTGCAAGAAAAGGGAGAAGCATGCAATGGCAATGGATAAACACAAAAAGATGCAATGTTGGGCAATGTTGAAGCGTTTAATGGTTGGAAGAGATGCATGGATTTTCAAAAAGAAAGACAATGAGTTTACGGAAATTGAATCAAAGCTAAAAATATTGGAGTACTCAAAAGTTGATGAGTTTGCGGATGACATGGTGAGTGTCTTCTCTTATCCCTTGGGTTATCCTCCAAGAAGTGAGATACACAAAATTGCAACAAGAATCACTCAATCTTTTGAGTTCACTTGGAAAACCATGAAGAAAAGAGCATTCAACCGGTTAATTTGTGGTTTTAACCGATTAAATGTGTGTCCTTGTAACAGCTTTTTGAAAATTTGTTTTAACTGA 603 0.3599 MGELEQSCKKLVIKIYSSCPQKCEGVCELKNKKGYAKTIWVDTKIPLQSGARNQEIRYKGCDERKKKERLRMECKKREKHAMAMDKHKKMQCWAMLKRLMVGRDAWIFKKKDNEFTEIESKLKILEYSKVDEFADDMVSVFSYPLGYPPRSEIHKIATRITQSFEFTWKTMKKRAFNRLICGFNRLNVCPCNSFLKICFN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1116 200 SMART bromo_6 83 173 IPR001487 GO:0005515
Pvu11g1116 200 Gene3D - 74 174 IPR036427 GO:0005515
Pvu11g1116 200 PANTHER PROTEIN, PUTATIVE-RELATED 61 174 - -
Pvu11g1116 200 SUPERFAMILY Bromodomain 77 171 IPR036427 GO:0005515
Pvu11g1116 200 PANTHER TRANSCRIPTION FACTOR GTE8 61 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1116 Pvu-Chr11 13007678 13013387 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1116 - - pvu:PHAVU_011G108400g 412.92