Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1114 ATGGGAGAATTAGAACAATCTTGCAAGAAGCTGATCATAAAAATTTATTCTTCATGTCCTCAAAAGTGTGAAGGTGTATGTGAATTGAAGAATAAGAAGGGTTACGCAAAAGCAATATGGGTTGATACAAAAATTCCATTACAATCTGGTGCCAGAAATCAAGAAATTAGGTACAAGGGGTGTGATGAGAGAAAGAAGAAAGAAAGATTGAGCATGGAGTGCAAGAAAAGGGAGAAGCATGCAATGGCAATGGATAAACACAAAAAGATGCAATGTTGGGTAATGTTGAAGCGTTTAATGGTTGGAAGAGATGCATGGATTTTCAAAAAGAGTGATCTTGGTGTCCATAAGAACCTGAAAAAGAAGAAGACAATGAGTTTACATGATATTGAATCAAAGCTAAAAAGATTGGAGTACTCAAAAGTTGATGAGTTTGAAGATGACATGGTGAGTGTCTTCTCTTATCCCTTGGGTTATCCTCCAAGAAGTGAGATACACAAAATTGCAACAAGAATCACTCAATCTTTTGAGCTCACTTGGAAAACAATGAAGAAAAGGTGGATAGTTGAAGAAAATCTTTAA 582 0.3574 MGELEQSCKKLIIKIYSSCPQKCEGVCELKNKKGYAKAIWVDTKIPLQSGARNQEIRYKGCDERKKKERLSMECKKREKHAMAMDKHKKMQCWVMLKRLMVGRDAWIFKKSDLGVHKNLKKKKTMSLHDIESKLKRLEYSKVDEFEDDMVSVFSYPLGYPPRSEIHKIATRITQSFELTWKTMKKRWIVEENL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1114 193 SUPERFAMILY Bromodomain 77 184 IPR036427 GO:0005515
Pvu11g1114 193 Pfam Bromodomain 122 170 IPR001487 GO:0005515
Pvu11g1114 193 PANTHER PROTEIN, PUTATIVE-RELATED 61 192 - -
Pvu11g1114 193 SMART bromo_6 83 185 IPR001487 GO:0005515
Pvu11g1114 193 Gene3D - 74 185 IPR036427 GO:0005515
Pvu11g1114 193 PANTHER TRANSCRIPTION FACTOR GTE8 61 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1114 Pvu-Chr11 12981979 12982560 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1114 - - pvu:PHAVU_011G108400g 320.087