Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1103 ATGGGACTGGCATCAAAGTTAAGCTTCAGCCGAGACAGATTAATGGAATGCTTCTTTTGGGCTGTTGGAATGATCTTCGAGCCTCAGTTGAGTGATCTCCGCAAAGGTTTAACAAAAGTTTCTTGCTTAATAACTACAATCGATGACGTTTATGATGTGTATGGCACCTTAGAGGAATTAGAGCTTTTCACAGCAGCTGTAGAAAGTTGGGATGTTAAAGCCATTCAAGTTCTCCCTGATTACATGAAGATATGTTTTCTGGCACTGTACAACACTGTCAACGAATTTGCCTATGATGCACTTAAAGAACAAGGACAAGATATTCTACCCTATCTCACCAAAGCATGGTCTGATATGTTGAAAGCATTCCTACAAGAAGCCAAATGGAGTCGTGACAGGCACATGCCAAGATTCAACGATTACCTCAACAATGCACGGATCTCAAACTCTGGGATAGTTATGCTCACCCATGTTTATTTCTTGCAAAACCACCGCATCACAGAAGAGGCACTTGAGTCCTTGGACAGTTACCACTCCCTCTTACAGAATATCTCCATTGTTTTTCGACTTTACAATGATTTGGTTACATCAAAGGCAGAGTTAGAGAGAGGGGAAGCAGCAAGCTCCATTCCATGTTACATGCGAGAAAGTGGTGCTAGTGAAGAGGGTGCTTACAAACACATCTTTAGTTTGCTTAATGAAACGTGGAAGAAGATGAACAAAGATCGAGTGTCGCAGTCTCCTTTCCCAAAAGCTTTCGTAGAAACAGCTATAAACCTTGCAAGAAATTCTCACTGCTTTTACCAGTTTGGAGATGGACTTGGAGCCCCAGATAGCACTGCCAAAAATCGCATACGATCTTTGATAATTGAACCCATTGCACTGTACGAGATGGACATTTCCACAAGTTCTTAA 915 0.4175 MGLASKLSFSRDRLMECFFWAVGMIFEPQLSDLRKGLTKVSCLITTIDDVYDVYGTLEELELFTAAVESWDVKAIQVLPDYMKICFLALYNTVNEFAYDALKEQGQDILPYLTKAWSDMLKAFLQEAKWSRDRHMPRFNDYLNNARISNSGIVMLTHVYFLQNHRITEEALESLDSYHSLLQNISIVFRLYNDLVTSKAELERGEAASSIPCYMRESGASEEGAYKHIFSLLNETWKKMNKDRVSQSPFPKAFVETAINLARNSHCFYQFGDGLGAPDSTAKNRIRSLIIEPIALYEMDISTSS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1103 304 Gene3D Farnesyl Diphosphate Synthase 1 294 IPR008949 -
Pvu11g1103 304 PANTHER OS04G0344100 PROTEIN-RELATED 1 294 - -
Pvu11g1103 304 SUPERFAMILY Terpenoid synthases 1 293 IPR008949 -
Pvu11g1103 304 SFLD Terpene Cyclase Like 1 C Terminal Domain 2 294 IPR034741 -
Pvu11g1103 304 Pfam Terpene synthase family, metal binding domain 1 238 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu11g1103 304 SFLD Isoprenoid Synthase Type I 2 294 - -
Pvu11g1103 304 PANTHER TERPENE SYNTHASE 12-RELATED 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1103 Pvu-Chr11 12670856 12672145 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1103 K12742 K19968 gmx:100782452 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1103 11 12670856 12672145 Pvu11g1103 11 12670856 12672145 ECH
Pvu5g1155 5 32664233 32665428 Pvu11g1103 11 12670856 12672145 PCT