Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1089 ATGATGAAGGTGGTGGTGGAGAACTTGACGGGAACACTTTTCTCCATTGAAGTGAGCAATGATGCAACAGTTGAAGATTTGAAGAGGGAAATTGAGAATCAACAAAAGCTACCTTCTGATCGTTTTGTGTTTATTCTTGATACTGATGAACGCACTGTAATTACTAAGGAGGAAGAAAAGGTGTCGCTGCTTGATTATGGAATTCAAGATGGATCTCGTATTTACCTGTTCTTCACCCCACTTGATGATGATTCTACTGAAAATTTCAGGTTAACTTATCTAGATTTTGATGACATTGGTTAA 303 0.3762 MMKVVVENLTGTLFSIEVSNDATVEDLKREIENQQKLPSDRFVFILDTDERTVITKEEEKVSLLDYGIQDGSRIYLFFTPLDDDSTENFRLTYLDFDDIG* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1089 100 Pfam Ubiquitin family 5 79 IPR000626 GO:0005515
Pvu11g1089 100 ProSiteProfiles Ubiquitin domain profile. 2 76 IPR000626 GO:0005515
Pvu11g1089 100 CDD Ubl_ubiquitin_like 4 77 - -
Pvu11g1089 100 Gene3D - 1 79 - -
Pvu11g1089 100 SUPERFAMILY Ubiquitin-like 1 81 IPR029071 -
Pvu11g1089 100 SMART ubq_7 2 79 IPR000626 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1089 - - lja:Lj3g3v2900800.1 127.487