Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1086 ATGATCAAGATAGTGACCCTCTTGTTGTATAAATTGATGACCTTTTTCTTGAGCTTCTCAAAATTGTTCAAGTTATATCATTTACCCAAAAAAGAAAGAGTTCTGACCATGGCTTCATCACTCTTCATGCCTTCATCCATAGTGGAAGAAGAAGCCAGGTTTGAAGCCGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAAGCTAACCAAAAGACCATACTCAGCTAGAGATGTGGTGTCCCTACGAGGTAACCTCAGACAAACCTATGGCTCAGATGAGATGGCCAAAAAGCTATGGCGCATTCTGAAGAACCACCAAGCCAATGGCACAGCCTCGAGGACTTTTGGTGCACTTGATCCTGTTCAGGTCACTCAGATGGCCAAACACTTGGACACCATCTATGTCTCAGGGTGGCAGTGTTCGGCCACTCATACCACCACCAATGAGCCAGGCCCTGACCTTGCTGATTACCCTTATGACACTGTCCCCAACAAGGTTGAGCACCTCTTCTTCGCTCAGCAATACCATGATAGGAAACAAAAAGAGGAGAGAATGAACATGAGCAGGGAAGAGAGGGCAAGGACCCCTTATGTTGATTACTTGAGACCAATTATAGCTGATGGTGACACAGGTTTTGGTGGAACCACAGCAACTGTGAAGCTTTGCAAGCTCTTTGTGGAGAGAGGCGCTGCTGGCATCCACATTGAGGACCAGTCTTCCGTGACCAAAAAGTGTGGCCACATGGCAGGGAAAGTTCTGGTTGCCATCAGTGAACACATCAATAGGCTCGTGGCAGCAAGGCTTCAGTTTGATGTCATGGGGGTGGAAACTGTTTTGGTGGCTAGAACAGATGCAGAAGCTGCTAATTTGGTTCAATCTAACATTGACACTAGGGACCACCAATTTATCTTGGGTGTGACCAACCCAAACCTTAGGGGAAAGAGCTTGGCAACTCTTATGGCAAAAGACATGGCTGCTGGGAAAAGTGGAGCTGAGCTTCAGGCTTTGGAGGATGAGTGGCTGTCAAAGGCACAGTTGAAGACTCTCTCAGAAGCAGTTGTGGAAGCAATTGGGAGGCAGAACATTGGAGAGGAAGAGAAGAGAAGGAATTTGAATGAGTGGATGCACCATTCAAGTTACGAAAGGTGCCTTTCCAATGAGGAAGGTAGGGAGATTGCTGAGAGGTTAGGAGTGAGGAACCTGTTTTGGGACTGGGACTTGCCTAGGACTAGAGAAGGGTTTTACAGGTTCAAAGGGTCTGTAACAGCATCAGTTGTAAGAGGTTGGGCCTTTGCTCCACATGCTGATGTGATATGGATGGAAACTGCAAGCCCCAATGTGGCTGAGTGCACAGAGTTTGCTGAGGGGGTTAGATCAAAGTACCCTGAGATGATGCTGGGGTACAACCTCTCTCCATCTTTCAACTGGGATGCTTCTGGCATGAGTGATGAGCAAATGAGAGACTTCATTCCCAAGATTGCAAAGTTGGGGTATGTGTGGCAGTTCATCACAGTTGGAGGTTTGCATTCTAATGCACTCATCACTTCAACATTTTCAAGAGACTTTGCCAACAGGGGCATGCTGGCTTATGTGGAGAGGATTCAGAGAGAGGAGAGGAACAATGGGGTTGACACACTTGCCCACCAGAAATGGGCTGGTGCTAACTACTATGACAGATACCTCAAGACTGTTCAAGGAGGTGTGGCTTCAACTGCTGCAATGGGAAAAGGAGTAACTGAAGATCAGTTTAAAGAATCATGGACTAGGCCAGGAGCTGTTGACATTGATAGAGGCAGTATTGTGGTTGCTAAGGCCAGAATGTGA 1836 0.4728 MIKIVTLLLYKLMTFFLSFSKLFKLYHLPKKERVLTMASSLFMPSSIVEEEARFEAEVAEVQAWWNSERFKLTKRPYSARDVVSLRGNLRQTYGSDEMAKKLWRILKNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQKEERMNMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANLVQSNIDTRDHQFILGVTNPNLRGKSLATLMAKDMAAGKSGAELQALEDEWLSKAQLKTLSEAVVEAIGRQNIGEEEKRRNLNEWMHHSSYERCLSNEEGREIAERLGVRNLFWDWDLPRTREGFYRFKGSVTASVVRGWAFAPHADVIWMETASPNVAECTEFAEGVRSKYPEMMLGYNLSPSFNWDASGMSDEQMRDFIPKIAKLGYVWQFITVGGLHSNALITSTFSRDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEDQFKESWTRPGAVDIDRGSIVVAKARM* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1086 611 Gene3D - 53 571 IPR040442 -
Pvu11g1086 611 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 48 571 IPR015813 GO:0003824
Pvu11g1086 611 Gene3D - 298 413 - -
Pvu11g1086 611 TIGRFAM isocit_lyase: isocitrate lyase 58 587 IPR006254 GO:0004451|GO:0019752
Pvu11g1086 611 ProSitePatterns Isocitrate lyase signature. 247 252 IPR018523 GO:0003824
Pvu11g1086 611 CDD ICL_PEPM 102 293 IPR039556 GO:0003824
Pvu11g1086 611 PIRSF ICL 405 590 IPR006254 GO:0004451|GO:0019752
Pvu11g1086 611 PIRSF ICL 48 317 IPR006254 GO:0004451|GO:0019752
Pvu11g1086 611 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 49 589 IPR006254 GO:0004451|GO:0019752
Pvu11g1086 611 Pfam Isocitrate lyase family 57 587 IPR006254 GO:0004451|GO:0019752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1086 K01637 - gmx:100782793 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1086 11 12262331 12265591 Pvu11g1086 11 12262331 12265591 ECH