Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1081 ATGGAAAAAAAAGTGAAATGTAATTACTGCAGCAAAATATTTAATGGAGGAATTTTCAGATTCAAACATCATCTTGCCGGAACAAGATATGATTCTGAACCTTGTGTATCAATACCAGAAGAAATCAAAGATTTAATGTTGAAAGTTGTCTCAGAAGCTAAAGATGCCTCATTGAAGAAAAGAAAGTTTAAGTTTAATAGTTTTGGACAAACTGATGGTGAGGAAGATAATGAAAGTATCTCTAGTAAGATGTTTAAAAGTAAATCTTCATCTTCTGATGGTGTTCAAGCTACTCTGAATCAAATGTACAAGAGAGGTGATAAAGAAAAAGTTGATGCTCAAGTTGCTGAATTTTTCTACACAAGTGCCATCCCATTCAATGTTATTAGAAAAACAGCTTTTGTAAAGATGTGTGACATGATTGGTAGATATGGTGTTGGCTATAAACCTTCAACATATCATGATATTAGAGAGAAGCTTTTGAAACAAGGCGTAGACAGAACTGATATAGAACTTGAAGAGTATAAGGATGAATGGAAGAGAACAGGTTGTACCATTATGTCTGATGGATGGACAGACAAAAAAAGACGGTCAATTTGTAATTTTTTGGTGAACAGTCCTAAAGGAACTGTGTTTCTATATTCATTAGATACCTCTGACATCTCAAAAACTGCAGATAAAGTATTTAAAATGTTGGATGATGCGGTAGAATTTGTTGGTGAGGAAAATGTACTGCAGGTAGTTACTGATAATGCTGCAAATTTCAAGGCAGGTGGAGAGCTTTTGATGCAAAAAAGGGAGCACTTATATTGGACTCCATGTGCTGCCCATTCTTGTTTGTATGAAATGAAAACATCATTGATGACCATGTTTAACTCTGAAGAATGGAAAACAAGCAAGTTTGGAACTTCTCAAGAAGGGAGAAAAGTTCAAAATGTGGTATTAGATATTGTTGCCCCTCTTATGGTGGTCCTTCGATTGGTAGATTCGGATGTAAAACCCGCAATGGGATTTATATATGAGGGGATGGATTGCGCCAAAGAGAAGATTAAAAGCAACTTTAGTAATATCAAGAAAAGGTGGATTAATCAGCTTCATAGGCCTTTGCATGCTGCCTATTACTTAAACCCCCAATTGCACTATCAACCAAACTTTAGAAATGATGATGCTGAGGTGAAGGAGGGGTTGTACATGTGCATGAGAAGATTGGTTAATAACGTTGCAGAAAGAACAAAAATCAATTTGCAACTTACTGATTTTCACCATGCAAGAGGAATATTTTCTTTGGAAGATGCAAAGCTGGGTAGGAAAGGTATGTTACCTGCAGATTGGTGGGAGATGTTTGGGGATAGAACTCCAGAACTAATGAGGTTTGTTGTTCGAGTTCATACAAAAAGAAGAAATTGTTTGCACCAAAAGAAAATGAATGACTTAGTTTATGTAATGTATAATTCGAAGTTGAGAAACAAACAAATTAGAAGATCTATTGCTCTTCCATTTGAAGACATTCAGTCCAATAATGAATGGATAACTGAAGAAGGAGATAATGTTGTTGAGGTTGAGCAAACTATACTTGAAAATGATGGTGTGAATGTTGACATAGGTGGAGGAACAAGTTTAAATGATTCAATTCCAGATGCAGCTAATTTTGATAATATAGTTTTTGATGATGATGTTGATGATGAAGATGATGATGATGAACATGGTGATGATGAAGATGGAGATGATCATGAAGATCTTGGAGATGATTTCCTTAAAGGATTAGATGAATGA 1773 0.3514 MEKKVKCNYCSKIFNGGIFRFKHHLAGTRYDSEPCVSIPEEIKDLMLKVVSEAKDASLKKRKFKFNSFGQTDGEEDNESISSKMFKSKSSSSDGVQATLNQMYKRGDKEKVDAQVAEFFYTSAIPFNVIRKTAFVKMCDMIGRYGVGYKPSTYHDIREKLLKQGVDRTDIELEEYKDEWKRTGCTIMSDGWTDKKRRSICNFLVNSPKGTVFLYSLDTSDISKTADKVFKMLDDAVEFVGEENVLQVVTDNAANFKAGGELLMQKREHLYWTPCAAHSCLYEMKTSLMTMFNSEEWKTSKFGTSQEGRKVQNVVLDIVAPLMVVLRLVDSDVKPAMGFIYEGMDCAKEKIKSNFSNIKKRWINQLHRPLHAAYYLNPQLHYQPNFRNDDAEVKEGLYMCMRRLVNNVAERTKINLQLTDFHHARGIFSLEDAKLGRKGMLPADWWEMFGDRTPELMRFVVRVHTKRRNCLHQKKMNDLVYVMYNSKLRNKQIRRSIALPFEDIQSNNEWITEEGDNVVEVEQTILENDGVNVDIGGGTSLNDSIPDAANFDNIVFDDDVDDEDDDDEHGDDEDGDDHEDLGDDFLKGLDE* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1081 590 SUPERFAMILY Ribonuclease H-like 173 486 IPR012337 -
Pvu11g1081 590 PANTHER OSJNBA0013A04.12 PROTEIN 279 529 - -
Pvu11g1081 590 PANTHER OSJNBA0013A04.12 PROTEIN 3 278 - -
Pvu11g1081 590 PANTHER OS05G0326663 PROTEIN 279 529 - -
Pvu11g1081 590 PANTHER OS05G0326663 PROTEIN 3 278 - -
Pvu11g1081 590 MobiDBLite consensus disorder prediction 555 579 - -
Pvu11g1081 590 MobiDBLite consensus disorder prediction 555 590 - -
Pvu11g1081 590 MobiDBLite consensus disorder prediction 71 93 - -
Pvu11g1081 590 Pfam Protein of unknown function (DUF 659) 152 278 IPR007021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1081 Pvu-Chr11 12054457 12056612 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1081 - - pvu:PHAVU_011G105000g 1127.08