Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1070 ATGTCTTGGCTCCTCCGATCTACGAAGTCTAAGTTGCTCTCTTCTTCCTCTTCTTCACTTTCCAGAACCTTCCCTTACCTCTCCCGCACCACGCATTACCTCCCTCGCAATCAGATCGGACTTCTCTCTCCCCTCGCCGATCTCTTCCGCCGCAACACAGCCTCCACGCCTCCCGCCAGGGAAGACGCTTCTGGCGGAAACTTGACTGGTCTTCCCAAAGTTCCTGCGAATAAGCTTGGCTGTGATTCTCATGCGATCAATTCGTTGATGTACAAAGCTTCTGGACTGGACACCACTGTGCTGTCTGGAGTTAGATATGGCACTAGAGTTTGTGCTGCACAGAATCCAATGCTATCGGGAGTCAATACTATGATGGCTAGAAGTTTTGAGAGAAGTATGGAAGCTGGCACGTTGGGAATGATTGGTCATAAACGTTGTATGAGTGACGTCTCAAGTAAAACCAGTGAGACAAACACATCTGGTTTTCGCCCGTTATCTCCTCATCTCCCTCTTTATCAGCCCCAACTTTCTTCAACTCTCTCAATTTTTAATAGAATTGCTGGAGCTCTCTTAGCCGGTGTCATTTTGCTTTTTTATATGATATATATGAAAATGGGTTCGGTGAGCCTCACCTACGACTCTTTCTTCCAGTTCATATTTTATTCATCAAAACTCAACCTCCTTGTCATGGAGATCTCTGCCTTAGCCGTGACCTACCATCTGTATAGTGCAATTCGTCATTTACGCTTATGA 753 0.4622 MSWLLRSTKSKLLSSSSSSLSRTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAREDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGALLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1070 250 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 139 248 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Pvu11g1070 250 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 156 248 IPR034804 GO:0016020
Pvu11g1070 250 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 144 249 IPR034804 GO:0016020
Pvu11g1070 250 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 139 248 - -
Pvu11g1070 250 CDD SQR_TypeC_SdhC 163 248 - -
Pvu11g1070 250 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 163 248 IPR000701 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1070 Pvu-Chr11 11790780 11794930 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1070 K00236 K03885 gmx:100527396 347.051