Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1058 ATGTCACACAAAGGAGAAAACATTGAGTTATATGTGAGCACAAAGCTCCTACCAAGGGAAGACTTCACAGCATATGCAGATGTGTGCTTTAGAGAATTTGGTGACAGAGTTAAGCACACGACTACAGTGAAGATGGCTATGCAGCAAGGCATTATTGGGTTAAATATAATTTCTTTTGGTTATCTTCCAAAAACTAACTCCACTGATGATGTAAGGGCTGCTCAAAGGGCCTAA 234 0.4017 MSHKGENIELYVSTKLLPREDFTAYADVCFREFGDRVKHTTTVKMAMQQGIIGLNIISFGYLPKTNSTDDVRAAQRA* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1058 77 Gene3D Glycosidases 15 77 - -
Pvu11g1058 77 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 11 44 - -
Pvu11g1058 77 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 46 77 - -
Pvu11g1058 77 PANTHER GLYCOSYL HYDROLASE 11 44 IPR001360 GO:0004553|GO:0005975
Pvu11g1058 77 PANTHER GLYCOSYL HYDROLASE 46 77 IPR001360 GO:0004553|GO:0005975
Pvu11g1058 77 SUPERFAMILY (Trans)glycosidases 20 77 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1058 Pvu-Chr11 11561428 11561994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1058 11 77 Glycoside Hydrolase AT3G62750 31.624 6.86e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1058 - K01188 pvu:PHAVU_011G102800g 157.532