Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1055 ATGGGGTGCTCCATGAGAGTGTGTAGTGTCTTATTTTTGGTACTGTTGTTAGTGGCATCTGCTAGAGGGGAGGACCCTTATAGGTTTTATACTTGGAATGTCACATATGGAGACATTTATCCTCTTGGTGTTAAACAACAGGGGATTCTGATAAACTGGCAATTTCCAGGGCCACAAATTGAGGCCGTGACCAATGATAACTTGATTATCAATGTTTTCAATAGCTTGGATGAACCTTTCCTCTTATCCTGGAATGGAGTGCTGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGCACCAATTGTCCAATTTCACCAGGGCACAACTTCACTTATGTTCTTCAAGTAAAGGATCAAATTGGTAGCTACTTCTACTACCCTTCCCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGATTCAAAATTGCTAGCCGCCCCGGGATTCCGGTGCCTTTCCCTCCTCCGGCAGGAGATTTCACTATATTGGCAGGAGATTGGTACAAGAGAAATCACACAGATTTGAGGGCAATTTTGGATGGTGGAAATGACCTTCCCTTCCCTGATGGACTTATCATCAATGGACGTGGTTCCAATGCCTACACATTCACAGTTGATCAAGGCAAGACATACAGATTCAGGATTTCAAATGTGGGTCTCACAACTTCAATCAATTTCAGAATCCAAGGTCATAAAATGACAATTGTTGAGGTGGAAGGGACCCACACTCTCCAAAACATTTATGACTCACTTGATGTTCATCTGGGGCAGACTTACTCTGTGTTGGTTACAGCTGATCAACCACCCCAAGACTACCTTATTGTTGTCACAACTAGATTTACCTCTCAAGTGTTGAATGCTACCTCCATTTTTCGTTACAGTAACTCTGGAGGAAGTGTTACTGGCCTTTTTCCTTGGGGGCCAACTATTCAAGTTGATTGGTCTTTAAACCAAGCTCGTTCTCTTAGGAGGAATTTGACAGCAAGTGGGCCAAGACCTAATCCACAAGGATCATACCATTATGGTATGATAAACACAACTCGTACAATTAGACTTCAAAATTCTGCTCCAGTTATCAATGGCAAACAGAGATATGCTGTCAATAGTGTGTCCTTCATACCTGCTGATACACCACTTAAACTGGCTGATTACTACAAGATCCAAGGGGTGTTCTCACTTGGAAGTATCCCTGACAACCCCACTGGTGGTGGTGGTTACCTTCAAACTTCTGTCATGGAAGCCGATTTCCGTGCCTTTCTGGAGGTTGTGTTTGAGAATACTGAAGACACTGTGGAATCTTGGCACATTGACGGCCACAGCTTCTTTGTAGTAGGAATGGATGGAGGACTATGGTCACAAGCAAGCAGGCTTAGTTACAATTTAAGAGACACAATTTCTCGTTCCACAGTTCAGGTTTATCCCAAGTCATGGACTGCACTTTACGTACCTTTGGACAATGTGGGAATGTGGAATGTGAGATCTGAGAATTGGGTTCATCAGTATTTGGGCCAGCAATTTTACCTTAGGGTGTATTCTCCTGCAAATTCATGGAGAGATGAGTACCCAATTCCAAGTAATGCTCCGAGGTGTGGCAAGGCTGTGGGTCACTACTAA 1617 0.4385 MGCSMRVCSVLFLVLLLVASARGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIINVFNSLDEPFLLSWNGVLQRRNSWQDGVYGTNCPISPGHNFTYVLQVKDQIGSYFYYPSLAFHKAAGGYGGFKIASRPGIPVPFPPPAGDFTILAGDWYKRNHTDLRAILDGGNDLPFPDGLIINGRGSNAYTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMTIVEVEGTHTLQNIYDSLDVHLGQTYSVLVTADQPPQDYLIVVTTRFTSQVLNATSIFRYSNSGGSVTGLFPWGPTIQVDWSLNQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPVINGKQRYAVNSVSFIPADTPLKLADYYKIQGVFSLGSIPDNPTGGGGYLQTSVMEADFRAFLEVVFENTEDTVESWHIDGHSFFVVGMDGGLWSQASRLSYNLRDTISRSTVQVYPKSWTALYVPLDNVGMWNVRSENWVHQYLGQQFYLRVYSPANSWRDEYPIPSNAPRCGKAVGHY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1055 538 SUPERFAMILY Cupredoxins 344 534 IPR008972 -
Pvu11g1055 538 CDD CuRO_3_AAO_like_1 375 497 IPR034275 GO:0005507
Pvu11g1055 538 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Pvu11g1055 538 Gene3D - 27 148 IPR008972 -
Pvu11g1055 538 SUPERFAMILY Cupredoxins 24 174 IPR008972 -
Pvu11g1055 538 PANTHER L-ASCORBATE OXIDASE HOMOLOG 9 534 - -
Pvu11g1055 538 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Pvu11g1055 538 PANTHER MULTI-COPPER OXIDASE 9 534 IPR045087 -
Pvu11g1055 538 Gene3D - 159 333 IPR008972 -
Pvu11g1055 538 Pfam Multicopper oxidase 160 296 IPR001117 -
Pvu11g1055 538 SUPERFAMILY Cupredoxins 154 334 IPR008972 -
Pvu11g1055 538 Pfam Multicopper oxidase 378 512 IPR011706 GO:0005507|GO:0016491
Pvu11g1055 538 Gene3D - 343 536 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1055 Pvu-Chr11 11503459 11508201 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1055 - - gmx:100775285 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1055 11 11503459 11508201 Pvu11g1055 11 11503459 11508201 ECH