Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1010 ATGATCCCTATGGTAACAAAAAGAGCAATAACAGTGCTGCTATATGTGACAGTTCTCCAAACTGTGAAGGGTTTTCCACTACACACCAGTGATAGGTGGATTGTGAATGAAAATGGGAAGAGGGTGAAGCTAGCATGTGTGAATTGGGTGTCTCATTTGGATACTGTTGTTGCTGAGGGCTTAAGCCAACAACCTTTGGATACGATTTCCAAGAGAATCAAGTCTATGGGGTTCAACTGTGTGAGACTCACATGGCCACTTCTCTTGCTCACCAATCACTCTCTTGCTTCTCTCACTGTCAGAAACTCTTTCAAAAACCTTGCTCTTCTTCAATCCATCGATGCTGTTCAAGCCATCAACCCCTCCATCATCGATCTTCCCCTCATCAAAGCTTACCAGGAAGTGGTGAAAAGCCTGGGAGAAAATGATGTAATGGTGATTTTGGACAATCACGTGACTGTACCAGGGTGGTGTTGCAGTAGCATGGATGGCAATGGGTTCTTTGGGGATCAGTATTTTGATCCTGATCTCTGGATTATTGGCCTTACCAATATGGCTACACTTTTCAAAGGGGTGAGTAATGTGGTAGGCATGAGCTTGAGGAATGAGTTACGAGGTCCCAAACAAGATGTCAACCAATGGTACAGGTATATGCCAAAGGGAGCAGAAGCAGTGCATGCAGCAAATCCAGAAGTTCTTGTCATTCTTTCTGGTCTAAACTTTGACACTGACCTATCATTCATAAAAGAGGAGGCATTGAAACTGAGCTTCAATGGAAAACTAGTGTTGGAGGTGCACTGGTATAGCTTCAGTGAGGGTAAATCATGGACCTCAAGTAATGAAAACCAAGTGTGTGGGGAAGTCACAGAAAATCAAATGAGAATTGCAGGGTTCTTGTTGGACCAAGGATTGCCATTGTTTGTCAGTGAGTTTGGGCTGGACTTGAGAGGCTCAGATGCCAATGACAACAGATACATAAACTGTTTCATGGCCTTTGCAGCCCAACTTGACTTGGACTGGGCCCTATGGACACTTGGTGGGAGTTACTACATAAGAAAAGGAGTTGTTGGAATGAATGAGTCTTATGGTATTCTCAATTCAGATTGGAGTGAGGTTAGCAACCCTAGTTTCTTGCAAAGGATCTCAGCTATTCAAATTCCTTTTCGAGGGCCAGGTTTATCAGAAGCAAAACCATTCAAAGTGATTTTTCACCCCTTGACAGGTTTTTGCATCATAAGAAAGTCACTGGTTGAGGCATTGAGGTTGGGACCTTGTTCTAACTCTGATGGATGGGAGTACACAGAGCAAAACATACTATCAATAAAGGGTACCAATTTCTGTTTACAAGCAGAGGGAGAAGGGAAGCAAGCAAAAATTGGGAATATATGTTTAGCTCCCAATTCAAGATGGGAAATGATCTCTGATTCAAAGATGCATCTATCAACTCAAATCAATAACTCTTCTGGTCTTTGTCTTGATGTAGACAACAATAACATCATTGTCACCAACACTTGCAAATGTCTAAGCAAAGATAACACTTGTGAACCTGCAAGCCAATGGTTTAAAGTTGTTGACAGCACAAGGAATAATTAA 1593 0.4225 MIPMVTKRAITVLLYVTVLQTVKGFPLHTSDRWIVNENGKRVKLACVNWVSHLDTVVAEGLSQQPLDTISKRIKSMGFNCVRLTWPLLLLTNHSLASLTVRNSFKNLALLQSIDAVQAINPSIIDLPLIKAYQEVVKSLGENDVMVILDNHVTVPGWCCSSMDGNGFFGDQYFDPDLWIIGLTNMATLFKGVSNVVGMSLRNELRGPKQDVNQWYRYMPKGAEAVHAANPEVLVILSGLNFDTDLSFIKEEALKLSFNGKLVLEVHWYSFSEGKSWTSSNENQVCGEVTENQMRIAGFLLDQGLPLFVSEFGLDLRGSDANDNRYINCFMAFAAQLDLDWALWTLGGSYYIRKGVVGMNESYGILNSDWSEVSNPSFLQRISAIQIPFRGPGLSEAKPFKVIFHPLTGFCIIRKSLVEALRLGPCSNSDGWEYTEQNILSIKGTNFCLQAEGEGKQAKIGNICLAPNSRWEMISDSKMHLSTQINNSSGLCLDVDNNNIIVTNTCKCLSKDNTCEPASQWFKVVDSTRNN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1010 530 Gene3D Glycosidases 25 386 - -
Pvu11g1010 530 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 10 529 - -
Pvu11g1010 530 PANTHER CELLULASE (GLYCOSYL HYDROLASE FAMILY 5) PROTEIN 10 529 - -
Pvu11g1010 530 Pfam Cellulase (glycosyl hydrolase family 5) 63 346 IPR001547 GO:0004553|GO:0071704
Pvu11g1010 530 ProSiteProfiles Lectin domain of ricin B chain profile. 434 530 - -
Pvu11g1010 530 SUPERFAMILY (Trans)glycosidases 26 378 IPR017853 -
Pvu11g1010 530 CDD RICIN 399 512 IPR000772 -
Pvu11g1010 530 Gene3D - 403 521 - -
Pvu11g1010 530 Pfam Ricin-type beta-trefoil lectin domain 409 505 IPR000772 -
Pvu11g1010 530 SUPERFAMILY Ricin B-like lectins 399 506 IPR035992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1010 Pvu-Chr11 10206793 10214420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1010 25 528 Glycoside Hydrolase AT1G13130 58.580 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1010 - - gmx:100816102 886.33