Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0991 ATGGCTATGGCGCCTCGCAAACCTCGCGAGCGTGAAATGCTGTTCGACTCCCTCATCGCGCTCGTCTTCATTCTCGTCGCCTGCGTCGACCTCTGCGACGGTGCCACCGTCGTCGACGTCTACCGCCTCATCCAGTACGACATGTCCGGCGTTCCCTTCGGATCTCGACTTGCCAGCCTCAATCATCACGCCGCCTCACTCCACTTCTCTCCGCACGCTGATCTCTCTCGCACCGTCCTCCTCATACCTCTTCGCGAACTTAACATGTCTTTTGTTCAAGAATATATTTCAGAAAGCAAGCCTCTTGGGGGTTTAATATTTTTGCTTCCCCGGATGTTCAGTTTTGAAAGCAAAGATGGTATGGGAAATAACCATCGTGATGGGCCACTGAAGAATGTACTGGTGGAACTTGAACAAATACTCATACACGCCAACTTACCGTATCCTGTTTATTTTGCATTTGAGGATGACAATATTGATGCTGTGTTAGCTGATATCAAGAAGAATGATGTTACTGGTCAACCTGCTACTGCAACAACTGGCGGATACAAATTTGTTGTTTCAGCCGCAGAACCAAGGAAAGTTGTTTCTCCACCCATTACAAATATTCAGGGATGGTTGGCAGGACTGAAGACAGATGATGATGCTCATCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGCATTGTGGCTCTTCTTGAAATAGCTAGGCTGTTTTCTCTCTTGTATTCTAATCCAAAGACAAGAGGACAATACAATCTGCTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACTCGGAAGTGGCTTCGGAGCTTTGATCAACGTATGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCTTGGGAAAATGAATTGTGGATTCATGTGTCTAAGCCCCCAGAAAATGCCTTCATTAAGAAAATTGTGGAAGATTTTTCAAGTGTTGCAGAAGAATTAGGCTTTAAAGTGAATTTGAAGCATAAGAAAATAAACATTTCCAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACTCTATCTGGACTCTCTACAGCACCTGAATTGCTAGAAAAGACTGGTGGTTTGGTTGACGGCAGGCATTTTGTTAATGAAGCGACTATTGTCAGAAGTGTGAAATTAATTGCTGAAAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACATTCAAATATTTGCTGACAACACTAACTTGGCTGTTAATCCTTCTTATGTTCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTAGCTCCATTTCTCTCTAAAGATGATCCTTTTGTCATGGCACTAAGAAAGGAATTAGAAGATCACACTGACGAGGTAAATCTGCATAGAGATGTGCTAGAGGGGGTGTTTACTTTCTATGATTCAACCAGGGCAAAGCTGAATATATATCAGGTTGCAAGTGTGACATTTGACTTGCTGTTGCTTCTAGTATTGGGATCGTATTTAATTGTGCTCTTCTGTTTCTTGGTCATCACCACTAGGGGTCTTGATGATCTAATCAGTCTATTTCGGCGGCCTCCATCTCGAAAAGTGAAAACTGCATAG 1686 0.4383 MAMAPRKPREREMLFDSLIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVQEYISESKPLGGLIFLLPRMFSFESKDGMGNNHRDGPLKNVLVELEQILIHANLPYPVYFAFEDDNIDAVLADIKKNDVTGQPATATTGGYKFVVSAAEPRKVVSPPITNIQGWLAGLKTDDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEIARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRMRESIDYAICLDSIGSWENELWIHVSKPPENAFIKKIVEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSGLSTAPELLEKTGGLVDGRHFVNEATIVRSVKLIAESLARHIYGHQGKNIQIFADNTNLAVNPSYVRSWLDVLSQTPRVAPFLSKDDPFVMALRKELEDHTDEVNLHRDVLEGVFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFCFLVITTRGLDDLISLFRRPPSRKVKTA* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0991 561 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Pvu11g0991 561 CDD M28_nicalin_like 136 427 - -
Pvu11g0991 561 ProSitePatterns EF-hand calcium-binding domain. 242 254 IPR018247 -
Pvu11g0991 561 PANTHER NICALIN 9 560 - -
Pvu11g0991 561 PANTHER NICALIN 9 560 IPR016574 GO:0009966|GO:0016020
Pvu11g0991 561 Pfam Nicastrin 222 359 - -
Pvu11g0991 561 Gene3D Zn peptidases 153 387 - -
Pvu11g0991 561 SUPERFAMILY Zn-dependent exopeptidases 191 385 - -
Pvu11g0991 561 PIRSF Nicalin 4 556 IPR016574 GO:0009966|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0991 7 559 EF-hand Containing Proteins AT3G44330 72.662 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0991 - - gmx:100779713 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0991 11 9888697 9897916 Pvu11g0991 11 9888697 9897916 ECH