Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0990 ATGACTCGTGTGTTGGTCCAGAGAGGTTCTTCCGGTGGTGGTTCTTCCTCAAACGCCAGCCGGAGTGGTGGGTCTTCTTCCAATGCCTCGGTGCGTGCAGAGGCACAGGTTTTGGTTGCGCCGGAGAATACCGACGAGGTTGTTGTTGTTGTGCCAGATGACGTTTTGGAGAGTGGCGATAAGGGGAAGAGTGAGGAGAGTGTTCATTTTGAGCATGGTGATGGGTCGTGTGATGATGACGTGGCTGCTGCTGCTGTTGTTGAGAGTGATGTAAGGGAGGAGTTTGTGAAGAGTGGGCAGAGAGTTGGTGAAAGGGTTGTTGCAGAGAGTGAGGGTGCGAGTGGGGATTCTTCTTCCCCCCCTGTTGGTGGTGGTTCGTGTCCCCCGCCACCTCCGGTGCCGCCTCCCAAGCCTTCTTTGGCGGGGAACATGAATCCAAGGAGGAGTATAGCCGGGAGTTTGAATTCGGGTAGTGGTGGATCGTCGAGGAGGACATCTGCATGGCCGGTTGTTCCGGCCAGGACTTCGCCTGCTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAATAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTACGAAGTAAAAAAAATGCTGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGACCCTGAACTGTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGCAAGAGAGAGATCATTTTTCTCAGTTTATAACTGAAGGGTTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTTTATGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGTCCAATTCACATATACTCCTACAGCATAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGATACGCCACCAATTCGATTGAGTTTTCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGGCGCTTATCAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAATCTCAACAGGAACAACAGATAAATAATGCACTTTTAGCTGAGGGTAGGTTTTACTCTGATCTTGAGCTGACAGAAAAGGAAATTGAACGCATGGTCATAGAAGTTTCTCGAGCTGAGTACCTTTCAGATAGTGGTACATTTAAGCAACAGCTTGGTGACAGAGAGTCCTCTACCTCAAACGCTGAACCATCGTCTTCTGGAGCAACAGGATCATCCGGCACTGGTGGTGGAAAAGAGCATGGTTGTGATCTGAGTAGTGGAATGCAAATTTTACTATCGATGGGATTCACATACATTCAAGCGATTGAGGCTTACAGCATATTTGGAGACGATGTTGATTCTATGGTTTGTTACCTCTTAGAAACTGGCAGTAGCAGCAGACGAAAGGGCAAGGCCACTGAATGA 1542 0.4702 MTRVLVQRGSSGGGSSSNASRSGGSSSNASVRAEAQVLVAPENTDEVVVVVPDDVLESGDKGKSEESVHFEHGDGSCDDDVAAAAVVESDVREEFVKSGQRVGERVVAESEGASGDSSSPPVGGGSCPPPPPVPPPKPSLAGNMNPRRSIAGSLNSGSGGSSRRTSAWPVVPARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMLEDGNCLFRAVADQVYGDPELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSFHHGNHYNSLVDPRRLSIGAGLGFSSLRGTNVDKDQVKAAIKSQQEQQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDSGTFKQQLGDRESSTSNAEPSSSGATGSSGTGGGKEHGCDLSSGMQILLSMGFTYIQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0990 513 MobiDBLite consensus disorder prediction 56 77 - -
Pvu11g0990 513 PANTHER OTU DOMAIN CONTAINING PROTEIN 118 476 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 177 191 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 123 141 - -
Pvu11g0990 513 SUPERFAMILY Cysteine proteinases 214 350 IPR038765 -
Pvu11g0990 513 Pfam OTU-like cysteine protease 235 324 IPR003323 -
Pvu11g0990 513 ProSiteProfiles OTU domain profile. 227 350 IPR003323 -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 1 33 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 146 169 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 1 77 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 425 459 - -
Pvu11g0990 513 Gene3D - 209 360 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 94 199 - -
Pvu11g0990 513 MobiDBLite consensus disorder prediction 425 452 - -
Pvu11g0990 513 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 118 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0990 Pvu-Chr11 9863838 9870377 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0990 K12655 - gmx:100809162 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0990 11 9863838 9870377 Pvu11g0990 11 9863838 9870377 ECH