Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0968 ATGGCAAAAGCCCACCATCTCATTCTCCTTCTTCTTCTTCTTCTTCTCTCCGCTACTCTACAATTCTCTTCATCTTCACCCTCCGATCACCTCTACAATGTTGGAGAACTCGTCCCAATGTTTGTCAACAAAGTGGGACCCTTCAACAACCCCAGTGAGACCTATGAATACTATGATTTGCCATTCTGCGCCCCAGTCCCAATTGTAAAAAAGAAAGAGTCCCTGGGGGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCCGAGAGGACAAGACTGATGAGATCTTGTGCCCAAAGAAGCTTACAATTGATCAAATTGCGTTCTTTAAGCGAGCTATAAACCGTGAATTTTACTTCCAATTTTACCTGGATGATCTTCCATTCTGGGGGTTCATTGGGAAACTTGAAGAAGATAGGTGGACTCCTGGTGGAGGAGGACCAAACTATTACATTTTTCCACATGTACAATTTCATGTTCTTTACAATGGGAATCAAGTCATACAAGTAAATGCATTTGGCGATCCAAATCGTGCTGTAGATATTACTAAAGATCAAAGTATTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTAAAATACGTTTTGAGAACAGAATGGATAGATACTCAAGGGCTTCGTTGATGTCTGCGCATCAGCAAGTTCATTGGTTCTCGTTCATCAACTCAATTGTCATCATTTTGCTTTTGACTGGTTTGCTTGCCCTGCTTTATATGCGACATCTGAGGATTGATTTGAAAAAGTACTCTAATGCAAATGAAGAAGATAAAGAGGTTGGTTGGAAGTCCATCCACGGCGATGTATTCAGACCTCCTCCTAACTCATCCTTACTTTTTGCTGTTGTTGGAACTGGTACCCATTTGCTAATCTTGATTTGTGTCTTGCTGTTTCTAGCACTTATTGGCACCCTCTATCCCTACAATCGTGGTGGACTGTTAAATTGGCTTGTCTTGCTGTATGCTCTTTTTTCTGTATTTGCTGGCTACACTGCAGCATCCTTCCATGGCCAGTTTGCTGAGAATGGATGGGAAAGGACTGTTGGTCTTGCAGGGGTTCTTTACACTGGACCAGTGTTTGTTGCAGCCTCTATCCTCAACATAGTTGCAATCTCTTACAGGGCTACAGTTGGACTCCCATTTGGTTCCATTATTGTGATTCTTGTTTTATTCACATTTCTCGCCATCCCATTGCTTGCATTTGGTGGAGTGATTGGATACCGTTTTAGATCTAAATTTCAAAGCCCCTCTGCTACAAAGAGACACCCAAGAGAAATTCAACAGCTTGCTTGGTACAGGAGAACACCATTTCTAATGTTTATTGGGGGTCTTGTGCCTTTTAGTGCAATTGTCCTGCAACTACATCAGGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGTCACATTCATTCCAACCATTGTGATCATTGCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGGTCAGTGCTGTGTGGTGGCTCAACATCCATTTTCATGTTTGTGTATTGTATCTACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGTTATAATGCATGCCTATGCTATGCTTTCTTCCTAATATTTGGTGCCATCAGTTTCAGAGTTTCATTTCTCTTTGTTCGCTTTATATACCACAATGTTAAAAGAGAGTAA 1773 0.4106 MAKAHHLILLLLLLLLSATLQFSSSSPSDHLYNVGELVPMFVNKVGPFNNPSETYEYYDLPFCAPVPIVKKKESLGEVLNGDRLSNALYEFKFREDKTDEILCPKKLTIDQIAFFKRAINREFYFQFYLDDLPFWGFIGKLEEDRWTPGGGGPNYYIFPHVQFHVLYNGNQVIQVNAFGDPNRAVDITKDQSIDVKFTYSVTWNATKIRFENRMDRYSRASLMSAHQQVHWFSFINSIVIILLLTGLLALLYMRHLRIDLKKYSNANEEDKEVGWKSIHGDVFRPPPNSSLLFAVVGTGTHLLILICVLLFLALIGTLYPYNRGGLLNWLVLLYALFSVFAGYTAASFHGQFAENGWERTVGLAGVLYTGPVFVAASILNIVAISYRATVGLPFGSIIVILVLFTFLAIPLLAFGGVIGYRFRSKFQSPSATKRHPREIQQLAWYRRTPFLMFIGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFVTFIPTIVIIALVSIGLTYIQLSVEDHEWWWRSVLCGGSTSIFMFVYCIYFYVRSNMSGFLQLSFFIGYNACLCYAFFLIFGAISFRVSFLFVRFIYHNVKRE* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0968 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 11 589 - -
Pvu11g0968 590 Pfam Endomembrane protein 70 54 547 IPR004240 GO:0016021
Pvu11g0968 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 11 589 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0968 Pvu-Chr11 9604074 9607985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0968 13 590 Miscellaneous Gene Families AT2G01970 49.490 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0968 K17085 - gmx:100818419 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0968 11 9604074 9607985 Pvu11g0968 11 9604074 9607985 ECH