Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0960 ACTGTAGTGCAATATATTACTCGTCCGTATGTTGTTGATGGTGTTCAAGACGAATCTAATTACATCTTAGAACGTGTCTTCTGGTCGTTCAAGCCATGCATTGAAGGGTTAAAATATTGCAAGCCCATAGTTCAAGTTGATGGCACATTCTTGACTGGAAAATATCACAGCACTTTATTGACTGCCATCAGTCAAGATGGGAACCGAAACATTTTTCCATTAGCTTTCGCCATTGTTGAAGGTGAAACAAAGGAAGCCCTTATATGGTTTTTCCAATTGTTACGAGCATATGTCACACCTCAGTCAAATTTATGCATGATTACGGATAGAGGAACAGTAATATTATCAGCATTACAATCTCCAAAAGTTGCTTCCGAAGATGGTTTAACCTCAGTGTATTGCATACGCCATATAGCATCCAATTTCAATAAGAGGTTTAAAAATGTTGACTTAAAGCGGAAACTAATCAACATGGCTATGCGAGCAGAATTTCCACAGGCAGTCTCTTGGATTGATCAAATACCATTGAAAAAATGGACACAAGCCTATGATGGGGGCAAGAGGTACGGACATATGACAACAAATCTTGTTGAAAGCATCAACTCCGTTTTGAAAGGGTCCCGATCCTTACCGATTTGTGCTTTGGTTAAGACCATATTTGAAAGAACAAATGCTTGGTTTGTTGAACAAGCGACCAAAATGCAATGCATGTTGCGAGCCGAACATGAATTCCCAGATGATATAGTCGCTCTACTACGAAAGAATGAAGCACAATCTGCTATGTGCCATGTGCAAAGATATGACCGAGAAAATTCAGTCTTTGACGTACAAGATATGCTGACTATCGAACATCAGCGCTACCCAATAACATTCACAGTTAAATTAAATGAATGGTGGTGTGATTGTGGGGAATTTCAAGCTTTACATCTGCCTTGTTCACATGTAATTGTTATTTGCTCATTTTGTCATTTACAGGTAACGACATTTGTGGCCCCAGTATTCAGTCTGCATAATATTTTAAAGGCTTATGAGGTCCAATTTAATCCAATTCGAAATCAGGATTATTGGTCTACTTACATGGGACCAAATTTCTTACCTGACCCCATCATGCGTCGACATCAACCAGGAAGACCTAACACTCAACGCATTCGTAACGAAATGGATGATTCAATTCCAAATAAGCCAAAAAAATGTTCATATTGTAGAACGGAAGGTCACAATAAAAGCAATTGTCCGCACAAACAAGCTTAA 1251 0.3877 TVVQYITRPYVVDGVQDESNYILERVFWSFKPCIEGLKYCKPIVQVDGTFLTGKYHSTLLTAISQDGNRNIFPLAFAIVEGETKEALIWFFQLLRAYVTPQSNLCMITDRGTVILSALQSPKVASEDGLTSVYCIRHIASNFNKRFKNVDLKRKLINMAMRAEFPQAVSWIDQIPLKKWTQAYDGGKRYGHMTTNLVESINSVLKGSRSLPICALVKTIFERTNAWFVEQATKMQCMLRAEHEFPDDIVALLRKNEAQSAMCHVQRYDRENSVFDVQDMLTIEHQRYPITFTVKLNEWWCDCGEFQALHLPCSHVIVICSFCHLQVTTFVAPVFSLHNILKAYEVQFNPIRNQDYWSTYMGPNFLPDPIMRRHQPGRPNTQRIRNEMDDSIPNKPKKCSYCRTEGHNKSNCPHKQA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0960 416 ProSiteProfiles Zinc finger SWIM-type profile. 291 323 IPR007527 GO:0008270
Pvu11g0960 416 MobiDBLite consensus disorder prediction 372 395 - -
Pvu11g0960 416 Pfam SWIM zinc finger 293 320 IPR007527 GO:0008270
Pvu11g0960 416 SMART 26again6 298 325 IPR006564 GO:0008270
Pvu11g0960 416 PANTHER POLYPROTEIN, PUTATIVE-RELATED 18 160 - -
Pvu11g0960 416 PANTHER - 18 160 - -
Pvu11g0960 416 Pfam MULE transposase domain 43 141 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0960 Pvu-Chr11 9473704 9475078 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0960 - - var:108324534 588.571