Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0957 ATGGCAACCCAGAAGAAACAAGAGAAGATAAATGAGAATGAGAAGGAAGTGTCAAGCACATCAGCACAATGTTGTCGCCAAGCAATTTGTCGTCGCTGGACTGGCTCACATCCCATGTACCTGGTGAATATGTGGAGTTCTACTATCTCTAACTCATTACGATCTCATGTAAACACGATCATAATATATTTGAAAAACAAACCCAAACAAGAAAAAAACGTCCATTATGCACACTGGACAGAACTTTTTATCAACACTGCCAAGTCGTTTGACGTGGCCGACCATATCGTGCTACCCAAAGCAGACAAGCCAATTACCAAAGACGCCCAATGGGAACGTCTCGATGCTATTGTCAAACAATGGATATATAGCACCATTAGTACGGACCTTCTCCATACTATCATCACATCAGGAGCCACCGCCCAAGAAACTTGTGACCGCCTTGCCGACATCTTTCAAGACAACAAACACTCCAGAACCGTCTTTCTCGAACAAGAATTTGCTCGTATTCATATGGACCGGTACCCTACTGTTTCGGCCTACTGTCAGTATTTGAAGATGCTTGCCGACAAACTTGCAAATGTTGGATCATCGGTCAGTGACAACCGTCTCGTTCTCCAACTGGTGACGGGACTCTCGGTCGATTACGCCACCATTGCCACCCTCATTGAACAAAGTAATCCTCTTCCCTCTTTCTATAAAGCTCGTTCTATGCTTCTCTTGGTAGAAACATGTCGCTCTCGTGCTGTCACAACAGACACTGCTCTTCCACATCCACTGGTGCCAACACTCGACCACCATATGGTCGTGGTAAAGGCAATAAAGGTGGGCGCTCGGGTGGCGGTCGTGGACGAGGTCAGTATACTCCGCACCCTCGTGCTCCGCCTACCTCGTGGATGTGGTTGCCTTACAACCCTTGGGGTCAGGTTCCCAATTGGACACCACCGCCTTGCCCATACCCTACGAGTTCTTGGACACCACGACAACCATCAACCGCTTCATCTTCCCCTAGCATCCTTGGCCCTCGTCCTCAACAAGCGTTCGTCTCCCAGTCCGCACCTGCCGAGCCCTCAACCGGTATGTTTGTTCCTGCGGATATTGTTGCGGCTATGCAAACACTCTCTCTTCAACCACCAGATGACAACTGGTATATGGACACTGGGGTCACCTCTCATATGA 1179 0.4869 MATQKKQEKINENEKEVSSTSAQCCRQAICRRWTGSHPMYLVNMWSSTISNSLRSHVNTIIIYLKNKPKQEKNVHYAHWTELFINTAKSFDVADHIVLPKADKPITKDAQWERLDAIVKQWIYSTISTDLLHTIITSGATAQETCDRLADIFQDNKHSRTVFLEQEFARIHMDRYPTVSAYCQYLKMLADKLANVGSSVSDNRLVLQLVTGLSVDYATIATLIEQSNPLPSFYKARSMLLLVETCRSRAVTTDTALPHPLVPTLDHHMVVVKAIKVGARVAVVDEVSILRTLVLRLPRGCGCLTTLGVRFPIGHHRLAHTLRVLGHHDNHQPLHLPLASLALVLNKRSSPSPHLPSPQPVCLFLRILLRLCKHSLFNHQMTTGIWTLGSPLI* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0957 392 PANTHER RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN PROTEIN-RELATED 73 244 - -
Pvu11g0957 392 Pfam gag-polypeptide of LTR copia-type 111 244 - -
Pvu11g0957 392 PANTHER - 73 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0957 Pvu-Chr11 9429872 9432042 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0957 - - pvu:PHAVU_011G093200g 769.615