Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0955 ATGCATAAGGTCACAGAAGAAAAAGATGGATCTGAAATCGAAACCCTCAAACCAATCATTGGTTCGTTTTCTTTTCCACATTTAGCAGTTGTGAAACCTAACTTCTCCGTCAAGAGTAGTCTTCCGATGAAACGCACCGTTCGGCCTCTCTTCGCGCTCCTCCTTCTCCTCGTCTTCGCCGCTATGCTCACCTCACGCGCGGTCCTCCGCCGCGGCATCCTCTCCATCGAGCTGGAGTACCGCGTCCGGATCCGCAACCCTCCGCCGCTGCAGCTCAACGACACGCTCCTCCACCACGCCGCCGTTGAAATCGGCGAAGAGAAGTTCAAGCAGGAGATCCAGAACCTCCTTGACGGAAACTTCGGCAGCCACGCGCGCCACCGCACATTCGTCTCCTGGCGCAGATTCATTCACCACGACCGCGGCGGCGGAACCGCTTCCAACCTCCCGGCGACGCTCCGGTCGCCCCTTTTCTACCGGTACTGGCTCGACTTCCGGAAGGTTCTACACGATTGGTTCAGGAAGCGACGATTCCAACCCGGTATCATGTCCGAGTTGACTCGGTCAATTAAGCTTCCAATTGATTCGCTCAACAAAGTAGTCACCAATGACAAAAGAAAGTATTCTTCTTGTGCTGTTGTTGGGAACAGTGGGATTTTGCTGAATAGGGATTATGGAAGTGAAATTGATGCACATGAGGCTGTGATAAGGTTGAACAATGCTAGGGTTGATCATTTTGAGACCAAGGTTGGGAAGAAAACTAGTATATCATTTATGAACAGTAACATTCTGCATTTATGTGCTAGAAGGGCAGGGTGTTTTTGTCACCCTTATGGTGACCATGTTCCGATTGTCATGTACATTTGCCAAGCTGTGCATTTCTTGGATTACACTGTGTGCAATGTTTCTCACAAGGCTCCTTTGTTGGTCACTGATCCTAGGTTTGATGTGTTGTGTGCGCGGATTGTGAAGTATTATTCGTTGAAGAGGTTCGTGGAGGAGAGTGGGAAGGGCTTGGAGAAGTGGGGTGAGGCTCACGATGGGGCTCTTTTTCATTACTCTTCTGGGATGCAGGCTGTGATGCTGGCTTTGGGTATTTGTGATAGGGTTAGCATTTATGGGTTCGGGAAATCGACCTCTGCCAAGCATCATTACCACACTAACCAGAAGGCTGAGCTTCATTTGCATGATTATGAGGCTGAGTATGCGTTTTATAGGGACCTTGTTGATGGACACAGGCCAATACCCTTCCTTGAGGACAGGTTTAAGGTTCCTCCTGTTGTCATGTATCATTGA 1296 0.4961 MHKVTEEKDGSEIETLKPIIGSFSFPHLAVVKPNFSVKSSLPMKRTVRPLFALLLLLVFAAMLTSRAVLRRGILSIELEYRVRIRNPPPLQLNDTLLHHAAVEIGEEKFKQEIQNLLDGNFGSHARHRTFVSWRRFIHHDRGGGTASNLPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSIKLPIDSLNKVVTNDKRKYSSCAVVGNSGILLNRDYGSEIDAHEAVIRLNNARVDHFETKVGKKTSISFMNSNILHLCARRAGCFCHPYGDHVPIVMYICQAVHFLDYTVCNVSHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEAHDGALFHYSSGMQAVMLALGICDRVSIYGFGKSTSAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGHRPIPFLEDRFKVPPVVMYH* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0955 431 PIRSF Sialyl_trans 43 272 IPR012163 GO:0006486|GO:0008373
Pvu11g0955 431 PIRSF Sialyl_trans 323 413 IPR012163 GO:0006486|GO:0008373
Pvu11g0955 431 Pfam Glycosyltransferase family 29 (sialyltransferase) 193 410 IPR001675 GO:0006486|GO:0008373
Pvu11g0955 431 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 42 431 - -
Pvu11g0955 431 Gene3D Glycosyl transferase family 29 89 413 IPR038578 -
Pvu11g0955 431 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 42 431 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0955 176 375 Glycosyltransferase AT3G48820 25.243 1.16e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0955 K00786 - gmx:100816284 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0955 11 9416761 9418935 Pvu11g0955 11 9416761 9418935 ECH