Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0948 ATGTCTGAGTTCTTCAAGGGAAAGACCATTTTAATGACTGGCACAACGGGCTTTTTAGCAAAAGTTTTCTTGGAAAAGATTCTGAGAACCCAACCCCAAGTACACAAACTATATCTTCTCATCCGAGCAAAAACCATTGATTTGGCTGCACAACGCTTCCAAAATGAGGTCATTCGCACAGATTTATTTAGAGTGTTACGAGACCAATGGGGCGAAGATTTTGATTCTTTCATTTTCAAGAAGATTGTGGTCATATCAGGAGATGTTTCTCTCCATAATTTTGGTCTAGAAGATGAAAAGCTCAAGATTAAGATGTTTGAAGAGATCAACATTATTATAAATTTTGCAGCAACTACCAAATTTTATGAGAGATTTGACATCTCAATGGATGTAAATACAATGGGTGTCTTACACGTCTTAAACTTCGCAAAGCATTGTCCCAAGATAAAGATTTTTATGCAAATATCAACTGCATATGTGTGTGGAGAGATTAAGGATGAAAAAATAATTGTGCAAGAGAAACCCTTTGAGATGGGTCAGACCTTGAAAGAGTCCTCGAAATTAGATATAACTGAAGAAATGAATTTGTTGAAGAACAAGATAGATGAACTTCGATCAAAGAATGCTACTGAAAACACAATCAAAAATGCATTGAAAGATTATGGAATTGAAAGAGCAAATTTGTATGGTTGGCCAAATACATACGTATTCACAAAAGCAATGGGAGAGATGCAATTGGTTCATCATAAAGATAATGTTCCACTAATCATTATACGTCCCACCATGGTTACTAGTACCCTTAATGACCCATTTCCTGGTTGGATTGAAGGCTTGAGAACTCTCGACAACATAATATGTAGCTATGGTCAAGGGAAAATAACAAGCTTTCTTGGTCATCCCAAGACAATTTTGGATATTATACCTGCAGACATGGTTATCAATTGTATGATGGCAGCAATTGTTGCTTGTTCAAATCAAACTCCTAAGAATTTCATCTACCATATTTCATCATCATTAAGAAATCCATTCAGAATTGCTGATGTTCGTGATTACTGCTATCATTATTTCATTAAATCTGCATTGAAAAACAAAAATGGAAAGCCAATAATAGTGCCCAAGCCGACTTTGATATCAAGTAGGGTTGTTTTCGACATTTACATGAGAATTCGATATGTTTTTCCACTAAAGGTCTTAAATGTGGTGAACAAAGCATTTTTTCAATGCTCTCAAGATGTTTATGACGATAGCTACAAAAAATTCAAAAGGCTGACACGACTAGTTGAAGTATACAAACCATACCTGTTTTTTAAGGGCGTCTTTGATGATTCAAACACACAAAATTTACGAAGAGCAACAAGTAATAACATTGAGGTTGTTGGATTGAACTTTGACCCTAATAGTATTAATTGGAAAGACTACATGATGAACACACACATTCCTGGTCTTGTAAAGTATGCGTTGAAATGA 1467 0.3511 MSEFFKGKTILMTGTTGFLAKVFLEKILRTQPQVHKLYLLIRAKTIDLAAQRFQNEVIRTDLFRVLRDQWGEDFDSFIFKKIVVISGDVSLHNFGLEDEKLKIKMFEEINIIINFAATTKFYERFDISMDVNTMGVLHVLNFAKHCPKIKIFMQISTAYVCGEIKDEKIIVQEKPFEMGQTLKESSKLDITEEMNLLKNKIDELRSKNATENTIKNALKDYGIERANLYGWPNTYVFTKAMGEMQLVHHKDNVPLIIIRPTMVTSTLNDPFPGWIEGLRTLDNIICSYGQGKITSFLGHPKTILDIIPADMVINCMMAAIVACSNQTPKNFIYHISSSLRNPFRIADVRDYCYHYFIKSALKNKNGKPIIVPKPTLISSRVVFDIYMRIRYVFPLKVLNVVNKAFFQCSQDVYDDSYKKFKRLTRLVEVYKPYLFFKGVFDDSNTQNLRRATSNNIEVVGLNFDPNSINWKDYMMNTHIPGLVKYALK* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0948 488 Pfam Male sterility protein 391 488 IPR033640 -
Pvu11g0948 488 Gene3D - 3 368 - -
Pvu11g0948 488 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 324 IPR036291 -
Pvu11g0948 488 Pfam Male sterility protein 13 316 IPR013120 -
Pvu11g0948 488 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 485 IPR026055 GO:0080019
Pvu11g0948 488 CDD FAR-N_SDR_e 8 356 - -
Pvu11g0948 488 CDD FAR_C 417 487 IPR033640 -
Pvu11g0948 488 PANTHER FATTY ACYL-COA REDUCTASE 3 485 - -
Pvu11g0948 488 Coils Coil 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0948 Pvu-Chr11 9289761 9293893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0948 3 397 Acyl Lipid Metabolism Gene Families AT5G22500 50.000 3.11e-142 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0948 K13356 - gmx:100793736 531.561