Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0930 ATGTTTTTGGTGGCAAGACCATGCGGTTCTTCTTCTGCGCGTATTCATCATCTTCACTCCACTCCCACATCGCACCGTACCAGAAACGTCGTCGTTAGATGCTCCCTCAGCAGCGTGCAGGAGAAGAAGGAGAAACCTGAACTGGATTCGGAGCTCCAGACTTCGGTATCATTTCCGCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGCCAAAGCACGTGGAACGCGGAGGGGAGAATCCAAGGAAGCTCTAATTTTTCTGTTCTCACGAAGAAGGGGGAGTCTCAGGCTGAGACATCACGCCAAATGCTCATCGACGATAACTTCGATGCCTGCTTTGCCAGTCCTTTGGCTCGATCCAAGAAAACCGCTGAAATCATTTGGGGATCTCGCCAGGAACCCTTCATTCCCGACTTTGAATTGCGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAGGGGAAAGCAAAATTTGGTTCTGCTTTTCGTGAATGGCAGATAGATGCTGAGAATTTCATCATTGATGGTCATTATCCAGTTAGAGAGCTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGGGCCCGAGTATTTCAGAAAATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGATTTCATCCCAAGATCTGAGGGTGGATCTCCACATATTTGCCTTAACCGCTTAAACCAGACCCCTGGTTCACCTATTGCTGGTGGAAAATCTGGAGGTCGAGAGACAAGTAAGCGGATCGTACTTGTTTGTAATGGATCAACACAAGGAAGTGCAGAGGATGGTTTTCCTTTTGGTGGTGATCAACCATTGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTACTTGATTTGAAAGTGAATTCCATAATTAGCAGTCCTAACAAAGCATGTGTTGAGACAGCCACGGCAATCTCCCAGGTACAAGAAGCTGCAGACTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGAGCCTTGATGTTGAAACTATCTTCAAACAATCTGAAATGGATGTATCCAATTTTCCGCCATTTCAACCTGGTTGGTTAAATAGAGTTGATGATGGATTGAGAACAACATTATGGAATCAATCTGGAAAAGCCTGGCGATCATTGTTGGATGAAATATCTGATGAATCTAAGCCAGACGAAGTTATAGTGACAGTTGGTCCTCCTGCAATCCACATAGCACTAATGGGGCACTGCCTTAATTTGACTAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGCATCAGTGTTCTTGACTTCCCTGATGGAGCTAAGGGAAAAGGTGTCATCAGGTGCATAAATTATACTGCACACTTGGGGAGATGGTCCATACCTATCACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1530 0.4608 MFLVARPCGSSSARIHHLHSTPTSHRTRNVVVRCSLSSVQEKKEKPELDSELQTSVSFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDNFDACFASPLARSKKTAEIIWGSRQEPFIPDFELREIDLYSFQGLLKHEGKAKFGSAFREWQIDAENFIIDGHYPVRELWERARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGPEYFRKLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGRETSKRIVLVCNGSTQGSAEDGFPFGGDQPLNMLGVIQSQKSAELLLDLKVNSIISSPNKACVETATAISQVQEAADCLGADCVPRYVEMKQMGSLDVETIFKQSEMDVSNFPPFQPGWLNRVDDGLRTTLWNQSGKAWRSLLDEISDESKPDEVIVTVGPPAIHIALMGHCLNLTKEWLGSFHLDAGSISVLDFPDGAKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0930 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 430 509 - -
Pvu11g0930 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 33 250 - -
Pvu11g0930 509 CDD HP_PGM_like 66 247 IPR013078 -
Pvu11g0930 509 SUPERFAMILY Phosphoglycerate mutase-like 65 261 IPR029033 -
Pvu11g0930 509 CDD HP_PGM_like 284 484 IPR013078 -
Pvu11g0930 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 430 509 - -
Pvu11g0930 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 33 250 - -
Pvu11g0930 509 Gene3D - 65 252 IPR029033 -
Pvu11g0930 509 Gene3D - 277 496 IPR029033 -
Pvu11g0930 509 SUPERFAMILY Phosphoglycerate mutase-like 282 497 IPR029033 -
Pvu11g0930 509 Pfam Histidine phosphatase superfamily (branch 1) 67 248 IPR013078 -
Pvu11g0930 509 Pfam Histidine phosphatase superfamily (branch 1) 285 477 IPR013078 -
Pvu11g0930 509 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Pvu11g0930 509 SMART PGAM_5 284 444 IPR013078 -
Pvu11g0930 509 SMART PGAM_5 66 220 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0930 Pvu-Chr11 9017988 9023391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0930 K22200 - gmx:100798495 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0930 11 9017988 9023391 Pvu11g0930 11 9017988 9023391 ECH